3D viewer locks up in Crosshair Plugin #19
Comments
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Thanks for the info @NicoleSchieber ! |
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Hi Kimberly,
I have since found that if I don’t resize the 3D viewer (although this is annoying) and press deny on the request for screen record I can use crosshair properly.
I have updated FIJI and there was a lot that updated including 3D viewer (ticked is ImageJ, Fiji, Java-8, and crosshair). After update on my original version I get the same problems.
In the second version of FIJI (ticked is ImageJ, Fiji, Java-8, and crosshair) – do you mean for me to untick the first 3? With these selected I still got the screen record message and on resizing the 3D viewer it locks up and I have to close everything and reopen. If I don’t resize the viewer I can work with it.
This is the log when I try to change the size of the 3D viewer window:
3D [dev] 1.6.0-scijava-2-pre11-daily-experimental daily
nFrames = 1
Keymap list file /Users/uqnschie/Library/Application Support/sc.fiji.bigdataviewer/keymaps/keymaps.yaml not found. Using builtin styles.
Appearance settings file /Users/uqnschie/Library/Application Support/sc.fiji.bigdataviewer/appearance.yaml not found. Using defaults.
com.jogamp.opengl.GLException: detachAllImpl failed: FBO implementation fault, FBO[name r/w 2/2, init true, bound true, size 671x640, samples 0/4, modified true/true, depth RenderAttachment[type DEPTH, format 0x81a5, samples 0, 671x640, name 0xffffffff, obj 0x11353fb3], stencil null, colorbuffer attachments: 1/8, with 1 textures: [TextureAttachment[type COLOR_TEXTURE, target GL_TEXTURE_2D, level 0, format 0x8051, 671x640, border 0, dataFormat 0x1907, dataType 0x1401; min/mag 0x2600/0x2600, wrap S/T 0x812f/0x812f; name 0xffffffff, obj 0x111bbc64], null, null, null, null, null, null, null], msaa[null, hasSink false, dirty true], state FBO implementation fault, obj 0x138b60f8]
at com.jogamp.opengl.FBObject.detachAllImpl(FBObject.java:2250)
at com.jogamp.opengl.FBObject.reset(FBObject.java:1191)
at org.scijava.java3d.JoglPipeline.resizeOffscreenLayer(JoglPipeline.java:6290)
at org.scijava.java3d.Canvas3D.setViewport(Canvas3D.java:4864)
at org.scijava.java3d.Renderer.doWork(Renderer.java:993)
at org.scijava.java3d.J3dThread.run(J3dThread.java:271)
Exception occurred in RenderingErrorListener:
java.lang.RuntimeException
at ij3d.ImageWindow3D$ErrorListener.errorOccurred(ImageWindow3D.java:351)
at org.scijava.java3d.VirtualUniverse.notifyRenderingErrorListeners(VirtualUniverse.java:1198)
at org.scijava.java3d.NotificationThread.processNotifications(NotificationThread.java:86)
at org.scijava.java3d.NotificationThread.run(NotificationThread.java:104)
Best,
Nicole
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Thanks @NicoleSchieber - that's perfect. Good to know that you get the same errors in an updated + new Fiji. |
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So I looked into this some more and unfortunately this seems to be a known issue with the ImageJ 3D Viewer on Macs: As it's an issue with the external 3D viewer code, there's no simple fix unfortunately. At some point, it would make sense to update from using the 3D Viewer to SciView (which is a more recent 3D viewer). I won't have time to do this in the near future though, as it's a big change. Sorry I can't be of more help @NicoleSchieber ! I'll let you know if I find time to check out SciView as an alternative. |
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Thanks Kimberly,
That is good to know in a way that is a known error. Thanks so much for looking into it!
Best,
Nicole
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When I have a file open in Crosshair as soon as I try to move the model in the 3D viewer it locks up and I have to close and try again. This happens consistently, maybe 1 in 10 I manage to be able to manipulate the model in the 3D viewer. It comes with the message that FIJI wants access to record the computers screen. I have attached this message as well as the view of my computer where this option looks to me that I have accepted already? I am doing this on a MacOS Monterey Version 12.6. My FIJI is IMAGEj2 version 2.9.0/1.54f.
Do you need more information?
Error messages:
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