From 15b3ec827e620fb1ee0048d66abf907784a70cfb Mon Sep 17 00:00:00 2001 From: Mathieu Boudreau Date: Sat, 25 May 2024 03:23:58 -0300 Subject: [PATCH] Debug --- run.sh | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/run.sh b/run.sh index 5f11142..fc3ba62 100755 --- a/run.sh +++ b/run.sh @@ -58,7 +58,7 @@ echo "[INFO] Running $USER_SCRIPT_DIR/main.sh in container..." chmod +x algos/ads_2/main.sh -docker exec "$PIPELINE_NAME" bash -c "cd /seg_ci && ./main.sh" +docker exec "$PIPELINE_NAME" bash -c "cd /seg_ci && chmod +777 main.sh && ./main.sh" echo "[INFO] Consolidating output in output/${PIPELINE_NAME}" OUTPUT_FILES=$(ls output/${PIPELINE_NAME}/*.nii* 2> /dev/null | wc -l)