diff --git a/README.md b/README.md index c5e0bf9..cf775a0 100644 --- a/README.md +++ b/README.md @@ -17,7 +17,7 @@ deployed via docker-compose ## Citation -A pre-print of the related manuscript can be found at [biorxiv](https://www.biorxiv.org/content/10.1101/2021.04.13.439667v1). +Please cite [Reisle, C. et al. A platform for oncogenomic reporting and interpretation. Nat. Commun. 13, 1–11 (2022)](https://www.nature.com/articles/s41467-022-28348-y) ## Building the Docs (Developers) diff --git a/docs/faq.md b/docs/faq.md index a22bb89..64a859d 100644 --- a/docs/faq.md +++ b/docs/faq.md @@ -21,7 +21,7 @@ in the demo database it would result in the following matches ## How do I cite PORI? -Please cite the following pre-print [Reisle, et. al. 2021](https://www.biorxiv.org/content/10.1101/2021.04.13.439667v1). +Please cite [Reisle, C. et al. A platform for oncogenomic reporting and interpretation. Nat. Commun. 13, 1–11 (2022)](https://www.nature.com/articles/s41467-022-28348-y) ## How Can I Migrate Our Existing KB to GraphKB? diff --git a/docs/index.md b/docs/index.md index 6b59b81..2ef238c 100644 --- a/docs/index.md +++ b/docs/index.md @@ -1,7 +1,7 @@ # About The Platform for Oncogenomic Reporting and Interpretation (PORI) is an open source collection of -software designed to support scaleable precision oncology. The platform has two main components: +software designed to support scalable precision oncology. The platform has two main components: a graph knowledge base ([GraphKB](./graphkb)) and an integrated pipeline reporting application ([IPR](./ipr)). This site contains central documentation for the platform as well as setup and installation instructions. @@ -11,5 +11,4 @@ Click on the menu icon (:material-menu:) to see a full table of contents for thi ## Citation -A pre-print of the related manuscript can be found at -[biorxiv](https://www.biorxiv.org/content/10.1101/2021.04.13.439667v1). +Please cite [Reisle, C. et al. A platform for oncogenomic reporting and interpretation. Nat. Commun. 13, 1–11 (2022)](https://www.nature.com/articles/s41467-022-28348-y)