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NAMESPACE
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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(box_plot)
export(chord_plot)
export(circos_heatmap)
export(corr_heatmap)
export(dendro_plot)
export(flower_plot)
export(gene_cluster_trend)
export(gene_rank_plot)
export(go_enrich)
export(go_enrich_bar)
export(go_enrich_dot)
export(go_enrich_net)
export(go_enrich_stat)
export(heatmap_cluster)
export(heatmap_group)
export(kegg_enrich)
export(kegg_enrich_bar)
export(kegg_enrich_dot)
export(kegg_enrich_net)
export(ma_plot)
export(network_plot)
export(pca_analysis)
export(pca_plot)
export(quantile_plot)
export(survival_plot)
export(table_cross)
export(table_filter)
export(table_merge)
export(table_split)
export(tomicsvis)
export(trend_plot)
export(tsne_analysis)
export(tsne_plot)
export(umap_analysis)
export(umap_plot)
export(upsetr_plot)
export(venn_plot)
export(violin_plot)
export(volcano_plot)
export(wgcna_pipeline)
import(Biobase)
import(RColorBrewer)
import(WGCNA)
import(e1071)
import(enrichplot)
import(ggnewscale)
import(ggplot2)
import(ggpolypath)
import(ggsci)
import(igraph)
import(pheatmap)
import(plotrix)
import(stringr)
importFrom(ComplexHeatmap,Legend)
importFrom(EnhancedVolcano,EnhancedVolcano)
importFrom(GGally,ggparcoord)
importFrom(Mfuzz,filter.NA)
importFrom(Mfuzz,filter.std)
importFrom(Mfuzz,mestimate)
importFrom(Mfuzz,mfuzz)
importFrom(Mfuzz,mfuzz.plot)
importFrom(Mfuzz,standardise)
importFrom(RColorBrewer,brewer.pal)
importFrom(Rtsne,Rtsne)
importFrom(UpSetR,fromList)
importFrom(UpSetR,upset)
importFrom(circlize,chordDiagram)
importFrom(circlize,circos.axis)
importFrom(circlize,circos.clear)
importFrom(circlize,circos.heatmap)
importFrom(circlize,circos.par)
importFrom(circlize,circos.text)
importFrom(circlize,circos.trackPlotRegion)
importFrom(circlize,colorRamp2)
importFrom(circlize,convert_height)
importFrom(circlize,get.cell.meta.data)
importFrom(clusterProfiler,enricher)
importFrom(cowplot,plot_grid)
importFrom(dplyr,distinct)
importFrom(dplyr,filter)
importFrom(factoextra,fviz_dend)
importFrom(ggcorrplot,ggcorrplot)
importFrom(ggforce,geom_mark_ellipse)
importFrom(ggplotify,as.ggplot)
importFrom(ggpubr,ggboxplot)
importFrom(ggpubr,ggmaplot)
importFrom(ggpubr,ggqqplot)
importFrom(ggpubr,ggviolin)
importFrom(ggpubr,stat_compare_means)
importFrom(ggrepel,geom_text_repel)
importFrom(grDevices,colorRamp)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,dev.off)
importFrom(grDevices,jpeg)
importFrom(grDevices,pdf)
importFrom(grDevices,rainbow)
importFrom(grDevices,rgb)
importFrom(graphics,abline)
importFrom(graphics,barplot)
importFrom(graphics,legend)
importFrom(graphics,par)
importFrom(graphics,strheight)
importFrom(graphics,strwidth)
importFrom(graphics,text)
importFrom(grid,grid.draw)
importFrom(pheatmap,pheatmap)
importFrom(randomcoloR,distinctColorPalette)
importFrom(reshape2,dcast)
importFrom(reshape2,melt)
importFrom(shiny,runApp)
importFrom(stats,as.dendrogram)
importFrom(stats,as.formula)
importFrom(stats,dist)
importFrom(stats,formula)
importFrom(stats,hclust)
importFrom(stats,mad)
importFrom(stats,median)
importFrom(stats,model.matrix)
importFrom(stats,prcomp)
importFrom(stats,quantile)
importFrom(stats,reorder)
importFrom(stats,sd)
importFrom(survival,Surv)
importFrom(survival,survfit)
importFrom(survminer,ggsurvplot)
importFrom(tidyr,drop_na)
importFrom(tidyr,separate)
importFrom(tidyr,separate_rows)
importFrom(umap,umap)
importFrom(utils,combn)
importFrom(utils,head)
importFrom(utils,tail)
importFrom(utils,write.table)
importFrom(vegan,anosim)
importFrom(venn,venn)