-
-# + [markdown] id="cce26209"
-# # âī¸ Prerequisites
-
-# + [markdown] id="affab565"
-# First of all we need to take care of a few **prerequisites**, most notably:
-#
-# - Install the various pip modules that we will be using.
-# - Install some linux specific dependencies of our [content loss](#content-loss).
-# - Initialize the Random Number Generator(s), so that our experiments can be replicated.
-# - Determine:
-# - The current working directory, as it's going to be used to reference various files such as the dataset, our model checkpoints e.t.c
-# - The available hardware backend. GPU utilization is preferable, as it results in higher complition time.
-# - `(Optionally)` Mount Google Drive, where we can load our dataset from.
-
-# + [markdown] id="19e0a6d0"
-# ## Determining the Current Working Directory
-
-# + cellView="code" id="945a9ccd"
-from pathlib import Path
-
-BASE_DIR = Path.cwd()
-
-# + [markdown] id="94c4d99f"
-# ## Mounting Google Drive
-
-# + cellView="code" colab={"base_uri": "https://localhost:8080/"} id="e24f0051" outputId="30ae6242-7890-45fb-97f4-7a3f98101b5c"
-GDRIVE_DIR = BASE_DIR / "drive"
-
-try:
- from google.colab import drive
-
- drive.mount(f"{GDRIVE_DIR}")
-except ImportError:
- pass
-
-# +
-SECRETS_DIR = GDRIVE_DIR / "MyDrive" / "Secrets"
-
-if GDRIVE_DIR.is_dir():
- THESIS_DIR = GDRIVE_DIR / "MyDrive" / "Thesis"
-else:
- THESIS_DIR = BASE_DIR
-
-OUTPUT_DIR = THESIS_DIR / "Output"
-
-if THESIS_DIR.is_dir():
- DATASET_DIR = THESIS_DIR / "Datasets"
-else:
- DATASET_DIR = BASE_DIR / "Datasets"
-# -
-
-# ## Configuring our Loggers
-
-# +
-import os
-
-LOGGING_LEVEL = os.environ.get("LOGGING_LEVEL", "CRITICAL").upper()
-
-LOGGING_CONFIG = {
- "version": 1,
- "disable_existing_loggers": False,
- "formatters": {
- "standard": {"format": "[%(asctime)s] %(levelname)s:%(name)s: %(message)s"}
- },
- "handlers": {
- "default": {
- "level": LOGGING_LEVEL,
- "formatter": "standard",
- "class": "logging.StreamHandler",
- },
- "file": {
- "level": LOGGING_LEVEL,
- "formatter": "standard",
- "class": "logging.FileHandler",
- },
- },
- "loggers": {"": {"handlers": ["default", "file"], "level": LOGGING_LEVEL}},
-}
-
-# + [markdown] id="16a902e2"
-# ## Installing [graphviz](https://graphviz.org/) & [libgraphviz-dev](https://packages.debian.org/jessie/libgraphviz-dev)
-
-# + [markdown] id="8c0cdd85"
-# The aforementioned packages are required by [PyINSECT](https://github.com/billsioros/PyINSECT/tree/implementing-HPGs) and more specifically its graph plotting methods.
-
-# + cellView="code" colab={"base_uri": "https://localhost:8080/"} id="919734ca" outputId="0767e6fd-b55e-4ebc-9e0e-11b243700c1c"
-# !sudo apt-get install graphviz libgraphviz-dev 1> /dev/null
-
-# + [markdown] id="7f5668f4"
-# ## Installing the required `pip` modules
-
-# + [markdown] id="aebad6f1"
-# - [torch](https://pytorch.org/) is our machine learning framework of choice.
-# - [numpy](https://numpy.org/), [sympy](https://www.sympy.org/en/index.html) and [scipy](https://www.scipy.org/) are used to in the context of nanorough surface generation.
-# - [plotly](https://plotly.com/) (which requires [pandas](https://pandas.pydata.org/)) as well as [matplotlib](https://matplotlib.org/) are used in order to plot various graphs.
-# -
-
-WHEEL_VERSION = "3.0.1"
-WHEEL_FILE = "roughml-%s-py3-none-any.whl" % (WHEEL_VERSION,)
-WHEEL_PATH = THESIS_DIR / "Binaries" / WHEEL_FILE
-
-import os
-import random
-
-# + cellView="code" colab={"base_uri": "https://localhost:8080/"} id="1057687b" outputId="2ab1f525-0235-4308-cabb-a7793277473b"
-import subprocess
-import sys
-
-import numpy as np
-
-pip_freeze_output = subprocess.check_output(
- [sys.executable, "-m", "pip", "freeze"]
-).decode()
-
-if "roughml" not in pip_freeze_output:
- if WHEEL_PATH.is_file():
- subprocess.check_call([sys.executable, "-m", "pip", "install", WHEEL_PATH])
- else:
- raise FileNotFoundError(WHEEL_PATH)
-
-# + [markdown] id="0192c059"
-# ## Initializing (a.k.a `Seeding`) the Random Number Generator(s)
-# + cellView="code" id="4d6c30c9"
-import torch
-
-SEED = 1234
-
-if SEED is not None:
- np.random.seed(SEED)
- random.seed(SEED)
- torch.manual_seed(SEED)
- torch.cuda.manual_seed(SEED)
- torch.backends.cudnn.deterministic = True
- os.environ["PYTHONHASHSEED"] = str(SEED)
-
-# + [markdown] id="6fce8a2a"
-# ## Determining available backend
-
-# + [markdown] id="5ca328f8"
-# By default, we are going to be utilizing the available CPU backend, if no GPU is available.
-
-# + cellView="code" id="520ba5c1"
-device = torch.device("cuda:0" if torch.cuda.is_available() else "cpu")
-# -
-
-
-# ## Setting up our callbacks
-
-# ### End-of-training callback
-
-# +
-from datetime import datetime
-
-from roughml.shared.notifiers import EndOfTrainingNotifier
-
-training_callback = None
-if SECRETS_DIR.is_dir():
- notifier = EndOfTrainingNotifier.from_json(SECRETS_DIR / "credentials.json")
-
- timestamp = datetime.now().strftime("%Y/%m/%d %H:%M:%S.%f")
-
- def training_callback(log_file=None, **context):
- notifier(
- ("Vasilis Sioros", "billsioros97@gmail.com"),
- log_file=log_file,
- dataset=context["dataset"],
- generator=context["generator"],
- discriminator=context["discriminator"],
- elapsed_time=context["elapsed_time"],
- succeeded=context["succeeded"],
- identifier=timestamp,
- )
-
-
-# -
-
-# ### Logging initialization callback
-
-
-def logging_callback(config, logging_dir):
- level = config.handlers.file.level.lower()
-
- config.handlers.file.filename = logging_dir / f"{level}.log"
-
- return config
-
-
-# + [markdown] id="60d78d1e"
-# # đ A naive-approach
-
-# + [markdown] id="ec374650"
-# ## Defining the **Generator** and the **Discriminator** instantiation callbacks
-
-# + cellView="code" id="d6594cb1"
-from roughml.models import PerceptronGenerator
-
-
-def get_generator():
- return PerceptronGenerator.from_device(device)
-
-
-# + cellView="code" id="cac059ee"
-from roughml.models import PerceptronDiscriminator
-
-
-def get_discriminator(generator):
- return PerceptronDiscriminator.from_generator(generator)
-
-
-# + [markdown] id="eb813599"
-# ## Training
-
-# + cellView="code" id="8a131c21"
-from torch.nn import BCELoss
-
-criterion = BCELoss().to(device)
-
-# + cellView="code" id="63114157"
-import functools
-
-from torch.optim import Adam
-
-from roughml.content.loss import NGramGraphContentLoss
-from roughml.data.loaders import load_multiple_datasets_from_pt
-from roughml.data.transforms import To, View
-from roughml.training.epoch import per_epoch
-from roughml.training.flow import TrainingFlow
-
-training_flow = TrainingFlow(
- output_dir=OUTPUT_DIR,
- logging={"config": LOGGING_CONFIG, "callback": logging_callback},
- training={
- "manager": {
- "benchmark": True,
- # Uncomment if you want to enable checkpointing
- # "checkpoint": {"multiple": True},
- "train_epoch": per_epoch,
- "log_every_n": 10,
- "criterion": {"instance": criterion},
- "n_epochs": 10,
- "train_ratio": 0.8,
- "optimizer": {
- "type": Adam,
- "params": {"lr": 0.1, "weight_decay": 0},
- },
- "dataloader": {
- "batch_size": 256,
- "shuffle": True,
- "num_workers": 0,
- },
- },
- "callbacks": [
- training_callback,
- ],
- },
- content_loss={
- "type": NGramGraphContentLoss,
- # Uncomment if you want to enable checkpointing
- # "cache": "n_gram_graph_content_loss.pkl",
- },
- data={
- "loader": functools.partial(
- load_multiple_datasets_from_pt,
- DATASET_DIR,
- transforms=[To(device), View(1, 128, 128)],
- limit=(2, 10),
- )
- },
- animation={
- "indices": [
- 0,
- ],
- "save_path": "perceptron_per_epoch_animation.mp4",
- },
- plot={
- "grayscale": {"limit": 10, "save_path_fmt": "grayscale/%s_%02d.png"},
- "surface": {"limit": 10, "save_path_fmt": "surface/%s_%02d.png"},
- "against": {"save_path_fmt": "against_%s.png"},
- },
- suppress_exceptions=False,
-)
-
-# + colab={"base_uri": "https://localhost:8080/", "height": 573} id="836ed418" outputId="f4d7ef3c-027c-4725-9f07-50e4d7c28ff1" tags=[]
-# training_flow(get_generator, get_discriminator)
-
-# + [markdown] id="fe589c1a"
-# # đ A CNN based approach
-
-# + [markdown] id="b16a4946"
-# ## Instantiating the **Generator** and the **Discriminator** Networks
-
-# + cellView="code" id="e301a7a0"
-from roughml.models import CNNGenerator
-
-
-def get_generator():
- return CNNGenerator.from_device(device)
-
-
-# + cellView="code" id="5a8a9aad"
-from roughml.models import CNNDiscriminator
-
-
-def get_discriminator(generator):
- return CNNDiscriminator.from_generator(generator)
-
-
-# + [markdown] id="7bbbcc22"
-# ## Training
-
-# + cellView="code" id="45778b4c"
-from torch.nn import BCELoss
-
-criterion = BCELoss().to(device)
-
-# + cellView="code" id="82fb12f6"
-import functools
-
-from torch.optim import Adam
-
-from roughml.content.loss import ArrayGraph2DContentLoss
-from roughml.data.transforms import To, View
-from roughml.training.epoch import per_epoch
-
-training_flow = TrainingFlow(
- output_dir=OUTPUT_DIR,
- logging={"config": LOGGING_CONFIG, "callback": logging_callback},
- training={
- "manager": {
- "benchmark": True,
- # Uncomment if you want to enable checkpointing
- # "checkpoint": {"multiple": True},
- "train_epoch": per_epoch,
- "log_every_n": 10,
- "criterion": {"instance": criterion},
- "n_epochs": 10,
- "train_ratio": 0.8,
- "optimizer": {
- "type": Adam,
- "params": {"lr": 0.0002, "betas": (0.5, 0.999)},
- },
- "dataloader": {
- "batch_size": 32,
- "shuffle": True,
- "num_workers": 0,
- },
- },
- "callbacks": [
- training_callback,
- ],
- },
- content_loss={
- "type": ArrayGraph2DContentLoss,
- # Uncomment if you want to enable checkpointing
- # "cache": "n_gram_graph_content_loss.pkl",
- },
- data={
- "loader": functools.partial(
- load_multiple_datasets_from_pt,
- DATASET_DIR,
- transforms=[To(device), View(1, 128, 128)],
- limit=(2, 10),
- )
- },
- animation={
- "indices": [
- 0,
- ],
- "save_path": "cnn_per_epoch_animation.mp4",
- },
- plot={
- "grayscale": {"limit": 10, "save_path_fmt": "grayscale/%s_%02d.png"},
- "surface": {"limit": 10, "save_path_fmt": "surface/%s_%02d.png"},
- "against": {"save_path_fmt": "against_%s.png"},
- },
- suppress_exceptions=False,
-)
-
-# + colab={"base_uri": "https://localhost:8080/", "height": 573} id="3c4cdce1" outputId="c22dfcc0-c6d9-4726-c197-acf11bdec52f"
-training_flow(get_generator, get_discriminator)
-# -
-
-# # đ Dismounting Google Drive and persisting any changes made
-
-try:
- from google.colab import drive
-
- drive.flush_and_unmount()
-except ImportError:
- pass
diff --git a/PyINSECT b/PyINSECT
new file mode 160000
index 0000000..c6da053
--- /dev/null
+++ b/PyINSECT
@@ -0,0 +1 @@
+Subproject commit c6da0538efaf453b95305e1eee66f1b9ecf8ad2d
diff --git a/README.md b/README.md
index 969e525..d25a284 100644
--- a/README.md
+++ b/README.md
@@ -1,6 +1,124 @@
-# Nanorough surface Super-resolution
+
+
+ 
+
+
+ 
+
+
+ 
+
+
+ 
+
+
+ 
+
+
+ 
+
+
+ 
+
+
+ 
+
+
+
+
+--8<-- "LICENSE"
diff --git a/docs/index.md b/docs/index.md
new file mode 100644
index 0000000..612c7a5
--- /dev/null
+++ b/docs/index.md
@@ -0,0 +1 @@
+--8<-- "README.md"
diff --git a/Nanorough_surface_Super_resolution.ipynb b/docs/src/roughml.ipynb
similarity index 94%
rename from Nanorough_surface_Super_resolution.ipynb
rename to docs/src/roughml.ipynb
index bb549c6..be04e6e 100644
--- a/Nanorough_surface_Super_resolution.ipynb
+++ b/docs/src/roughml.ipynb
@@ -142,9 +142,7 @@
"LOGGING_CONFIG = {\n",
" \"version\": 1,\n",
" \"disable_existing_loggers\": False,\n",
- " \"formatters\": {\n",
- " \"standard\": {\"format\": \"[%(asctime)s] %(levelname)s:%(name)s: %(message)s\"}\n",
- " },\n",
+ " \"formatters\": {\"standard\": {\"format\": \"[%(asctime)s] %(levelname)s:%(name)s: %(message)s\"}},\n",
" \"handlers\": {\n",
" \"default\": {\n",
" \"level\": LOGGING_LEVEL,\n",
@@ -228,7 +226,7 @@
"outputs": [],
"source": [
"WHEEL_VERSION = \"3.0.1\"\n",
- "WHEEL_FILE = \"roughml-%s-py3-none-any.whl\" % (WHEEL_VERSION,)\n",
+ "WHEEL_FILE = \"roughgan-%s-py3-none-any.whl\" % (WHEEL_VERSION,)\n",
"WHEEL_PATH = THESIS_DIR / \"Binaries\" / WHEEL_FILE"
]
},
@@ -262,11 +260,9 @@
"\n",
"import numpy as np\n",
"\n",
- "pip_freeze_output = subprocess.check_output(\n",
- " [sys.executable, \"-m\", \"pip\", \"freeze\"]\n",
- ").decode()\n",
+ "pip_freeze_output = subprocess.check_output([sys.executable, \"-m\", \"pip\", \"freeze\"]).decode()\n",
"\n",
- "if \"roughml\" not in pip_freeze_output:\n",
+ "if \"roughgan\" not in pip_freeze_output:\n",
" if WHEEL_PATH.is_file():\n",
" subprocess.check_call([sys.executable, \"-m\", \"pip\", \"install\", WHEEL_PATH])\n",
" else:\n",
@@ -368,7 +364,7 @@
"source": [
"from datetime import datetime\n",
"\n",
- "from roughml.shared.notifiers import EndOfTrainingNotifier\n",
+ "from roughgan.shared.notifiers import EndOfTrainingNotifier\n",
"\n",
"training_callback = None\n",
"if SECRETS_DIR.is_dir():\n",
@@ -444,7 +440,7 @@
},
"outputs": [],
"source": [
- "from roughml.models import PerceptronGenerator\n",
+ "from roughgan.models import PerceptronGenerator\n",
"\n",
"\n",
"def get_generator():\n",
@@ -461,7 +457,7 @@
},
"outputs": [],
"source": [
- "from roughml.models import PerceptronDiscriminator\n",
+ "from roughgan.models import PerceptronDiscriminator\n",
"\n",
"\n",
"def get_discriminator(generator):\n",
@@ -507,11 +503,11 @@
"\n",
"from torch.optim import Adam\n",
"\n",
- "from roughml.content.loss import NGramGraphContentLoss\n",
- "from roughml.data.loaders import load_multiple_datasets_from_pt\n",
- "from roughml.data.transforms import To, View\n",
- "from roughml.training.epoch import per_epoch\n",
- "from roughml.training.flow import TrainingFlow\n",
+ "from roughgan.content.loss import NGramGraphContentLoss\n",
+ "from roughgan.data.loaders import load_multiple_datasets_from_pt\n",
+ "from roughgan.data.transforms import To, View\n",
+ "from roughgan.training.epoch import per_epoch\n",
+ "from roughgan.training.flow import TrainingFlow\n",
"\n",
"training_flow = TrainingFlow(\n",
" output_dir=OUTPUT_DIR,\n",
@@ -616,7 +612,7 @@
},
"outputs": [],
"source": [
- "from roughml.models import CNNGenerator\n",
+ "from roughgan.models import CNNGenerator\n",
"\n",
"\n",
"def get_generator():\n",
@@ -633,7 +629,7 @@
},
"outputs": [],
"source": [
- "from roughml.models import CNNDiscriminator\n",
+ "from roughgan.models import CNNDiscriminator\n",
"\n",
"\n",
"def get_discriminator(generator):\n",
@@ -679,8 +675,8 @@
"\n",
"from torch.optim import Adam\n",
"\n",
- "from roughml.data.transforms import To, View\n",
- "from roughml.training.epoch import per_epoch\n",
+ "from roughgan.data.transforms import To, View\n",
+ "from roughgan.training.epoch import per_epoch\n",
"\n",
"training_flow = TrainingFlow(\n",
" output_dir=OUTPUT_DIR,\n",
diff --git a/docs/src/roughml.md b/docs/src/roughml.md
new file mode 100644
index 0000000..ad6a7a1
--- /dev/null
+++ b/docs/src/roughml.md
@@ -0,0 +1,3 @@
+# Documentation for `RoughGAN`
+
+::: roughgan.models.cnn
diff --git a/mkdocs.yml b/mkdocs.yml
new file mode 100644
index 0000000..a46eeae
--- /dev/null
+++ b/mkdocs.yml
@@ -0,0 +1,99 @@
+site_name: RoughGAN
+site_description: "A nanorough surfaces oriented ML library"
+site_url: "https://billsioros.github.io/RoughGAN/"
+repo_url: "https://github.com/billsioros/RoughGAN"
+edit_uri: "edit/master/docs/"
+repo_name: "billsioros/RoughGAN"
+copyright: |
+ Copyright © 2023-2023 Vasilis Sioros
+nav:
+ - Overview: index.md
+ - Example: src/roughgan.ipynb
+ - Code Reference:
+ - RoughGAN: src/roughgan.md
+ - Contributing:
+ - Contributing Guidelines: CONTRIBUTING.md
+ - Code Of Conduct: CODE_OF_CONDUCT.md
+ - Changelog: CHANGELOG.md
+ - License: LICENSE.md
+theme:
+ name: material
+ features:
+ - search.suggest
+ - content.code.annotate
+ - content.tabs.link
+ - content.tooltips
+ - header.autohide
+ - navigation.expand
+ - navigation.indexes
+ - navigation.instant
+ - navigation.prune
+ - navigation.sections
+ - navigation.tabs
+ - navigation.tabs.sticky
+ - navigation.top
+ - navigation.tracking
+ - search.highlight
+ - search.share
+ - search.suggest
+ - toc.follow
+ - toc.integrate
+ palette:
+ - media: "(prefers-color-scheme: dark)"
+ scheme: slate
+ primary: teal
+ accent: teal
+ toggle:
+ icon: material/weather-night
+ name: Switch to light mode
+ - media: "(prefers-color-scheme: light)"
+ scheme: default
+ primary: green
+ accent: green
+ toggle:
+ icon: material/weather-sunny
+ name: Switch to dark mode
+ font:
+ text: Roboto
+ code: Roboto Mono
+watch:
+ - src/roughgan
+plugins:
+ - search
+ - mkdocstrings:
+ default_handler: python
+ handlers:
+ python:
+ paths:
+ - src
+ rendering:
+ show_source: true
+ options:
+ docstring_style: google
+ docstring_options:
+ ignore_init_summary: yes
+ merge_init_into_class: yes
+ show_submodules: no
+ - minify:
+ minify_html: true
+ - mkdocs-jupyter
+markdown_extensions:
+ - admonition
+ - pymdownx.emoji
+ - pymdownx.magiclink
+ - pymdownx.highlight
+ - pymdownx.inlinehilite
+ - pymdownx.snippets:
+ check_paths: true
+ - pymdownx.superfences
+ - pymdownx.tabbed
+ - pymdownx.tasklist
+ - toc:
+ permalink: ¤
+ - mdx_truly_sane_lists
+extra:
+ social:
+ - icon: fontawesome/brands/github
+ link: https://github.com/billsioros
+ version:
+ provider: mike
diff --git a/poetry.lock b/poetry.lock
index 78b5d31..e96a76a 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -1,24 +1,50 @@
+[[package]]
+name = "aiosignal"
+version = "1.3.1"
+description = "aiosignal: a list of registered asynchronous callbacks"
+category = "main"
+optional = false
+python-versions = ">=3.7"
+
+[package.dependencies]
+frozenlist = ">=1.1.0"
+
[[package]]
name = "appnope"
-version = "0.1.2"
+version = "0.1.3"
description = "Disable App Nap on macOS >= 10.9"
category = "main"
optional = false
python-versions = "*"
+[[package]]
+name = "asttokens"
+version = "2.2.1"
+description = "Annotate AST trees with source code positions"
+category = "main"
+optional = false
+python-versions = "*"
+
+[package.dependencies]
+six = "*"
+
+[package.extras]
+test = ["astroid", "pytest"]
+
[[package]]
name = "attrs"
-version = "21.2.0"
+version = "23.1.0"
description = "Classes Without Boilerplate"
category = "main"
optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
+python-versions = ">=3.7"
[package.extras]
-dev = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "mypy", "pytest-mypy-plugins", "zope.interface", "furo", "sphinx", "sphinx-notfound-page", "pre-commit"]
-docs = ["furo", "sphinx", "zope.interface", "sphinx-notfound-page"]
-tests = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "mypy", "pytest-mypy-plugins", "zope.interface"]
-tests_no_zope = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "mypy", "pytest-mypy-plugins"]
+cov = ["attrs[tests]", "coverage[toml] (>=5.3)"]
+dev = ["attrs[docs,tests]", "pre-commit"]
+docs = ["furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphinxcontrib-towncrier", "towncrier", "zope-interface"]
+tests = ["attrs[tests-no-zope]", "zope-interface"]
+tests-no-zope = ["cloudpickle", "hypothesis", "mypy (>=1.1.1)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
[[package]]
name = "backcall"
@@ -28,81 +54,55 @@ category = "main"
optional = false
python-versions = "*"
-[[package]]
-name = "backports.entry-points-selectable"
-version = "1.1.0"
-description = "Compatibility shim providing selectable entry points for older implementations"
-category = "dev"
-optional = false
-python-versions = ">=2.7"
-
-[package.dependencies]
-importlib-metadata = {version = "*", markers = "python_version < \"3.8\""}
-
-[package.extras]
-docs = ["sphinx", "jaraco.packaging (>=8.2)", "rst.linker (>=1.9)"]
-testing = ["pytest (>=4.6)", "pytest-flake8", "pytest-cov", "pytest-black (>=0.3.7)", "pytest-mypy", "pytest-checkdocs (>=2.4)", "pytest-enabler (>=1.0.1)"]
-
[[package]]
name = "black"
-version = "21.9b0"
+version = "23.3.0"
description = "The uncompromising code formatter."
category = "dev"
optional = false
-python-versions = ">=3.6.2"
+python-versions = ">=3.7"
[package.dependencies]
-click = ">=7.1.2"
+click = ">=8.0.0"
mypy-extensions = ">=0.4.3"
-pathspec = ">=0.9.0,<1"
+packaging = ">=22.0"
+pathspec = ">=0.9.0"
platformdirs = ">=2"
-regex = ">=2020.1.8"
-tomli = ">=0.2.6,<2.0.0"
-typed-ast = {version = ">=1.4.2", markers = "python_version < \"3.8\""}
-typing-extensions = [
- {version = ">=3.10.0.0", markers = "python_version < \"3.10\""},
- {version = "!=3.10.0.1", markers = "python_version >= \"3.10\""},
-]
+tomli = {version = ">=1.1.0", markers = "python_version < \"3.11\""}
+typing-extensions = {version = ">=3.10.0.0", markers = "python_version < \"3.10\""}
[package.extras]
colorama = ["colorama (>=0.4.3)"]
-d = ["aiohttp (>=3.6.0)", "aiohttp-cors (>=0.4.0)"]
+d = ["aiohttp (>=3.7.4)"]
jupyter = ["ipython (>=7.8.0)", "tokenize-rt (>=3.2.0)"]
-python2 = ["typed-ast (>=1.4.2)"]
uvloop = ["uvloop (>=0.15.2)"]
[[package]]
name = "bleach"
-version = "4.1.0"
+version = "6.0.0"
description = "An easy safelist-based HTML-sanitizing tool."
category = "dev"
optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
[package.dependencies]
-packaging = "*"
six = ">=1.9.0"
webencodings = "*"
-[[package]]
-name = "cachetools"
-version = "4.2.4"
-description = "Extensible memoizing collections and decorators"
-category = "main"
-optional = false
-python-versions = "~=3.5"
+[package.extras]
+css = ["tinycss2 (>=1.1.0,<1.2)"]
[[package]]
name = "certifi"
-version = "2021.10.8"
+version = "2023.5.7"
description = "Python package for providing Mozilla's CA Bundle."
category = "main"
optional = false
-python-versions = "*"
+python-versions = ">=3.6"
[[package]]
name = "cffi"
-version = "1.14.6"
+version = "1.15.1"
description = "Foreign Function Interface for Python calling C code."
category = "dev"
optional = false
@@ -119,40 +119,28 @@ category = "dev"
optional = false
python-versions = ">=3.6.1"
-[[package]]
-name = "chardet"
-version = "4.0.0"
-description = "Universal encoding detector for Python 2 and 3"
-category = "main"
-optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
-
[[package]]
name = "charset-normalizer"
-version = "2.0.6"
+version = "3.2.0"
description = "The Real First Universal Charset Detector. Open, modern and actively maintained alternative to Chardet."
category = "main"
optional = false
-python-versions = ">=3.5.0"
-
-[package.extras]
-unicode_backport = ["unicodedata2"]
+python-versions = ">=3.7.0"
[[package]]
name = "click"
-version = "8.0.3"
+version = "8.1.4"
description = "Composable command line interface toolkit"
category = "main"
optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
[package.dependencies]
colorama = {version = "*", markers = "platform_system == \"Windows\""}
-importlib-metadata = {version = "*", markers = "python_version < \"3.8\""}
[[package]]
name = "click-log"
-version = "0.3.2"
+version = "0.4.0"
description = "Logging integration for Click"
category = "dev"
optional = false
@@ -163,79 +151,84 @@ click = "*"
[[package]]
name = "colorama"
-version = "0.4.4"
+version = "0.4.6"
description = "Cross-platform colored terminal text."
category = "main"
optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
+python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,!=3.6.*,>=2.7"
[[package]]
-name = "commonmark"
-version = "0.9.1"
-description = "Python parser for the CommonMark Markdown spec"
+name = "contourpy"
+version = "1.1.0"
+description = "Python library for calculating contours of 2D quadrilateral grids"
category = "main"
optional = false
-python-versions = "*"
+python-versions = ">=3.8"
+
+[package.dependencies]
+numpy = ">=1.16"
[package.extras]
-test = ["flake8 (==3.7.8)", "hypothesis (==3.55.3)"]
+bokeh = ["bokeh", "selenium"]
+docs = ["furo", "sphinx-copybutton"]
+mypy = ["contourpy[bokeh,docs]", "docutils-stubs", "mypy (==1.2.0)", "types-Pillow"]
+test = ["Pillow", "contourpy[test-no-images]", "matplotlib"]
+test-no-images = ["pytest", "pytest-cov", "wurlitzer"]
[[package]]
-name = "cryptography"
-version = "35.0.0"
-description = "cryptography is a package which provides cryptographic recipes and primitives to Python developers."
+name = "coverage"
+version = "7.2.7"
+description = "Code coverage measurement for Python"
category = "dev"
optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
[package.dependencies]
-cffi = ">=1.12"
+tomli = {version = "*", optional = true, markers = "python_full_version <= \"3.11.0a6\" and extra == \"toml\""}
[package.extras]
-docs = ["sphinx (>=1.6.5,!=1.8.0,!=3.1.0,!=3.1.1)", "sphinx-rtd-theme"]
-docstest = ["doc8", "pyenchant (>=1.6.11)", "twine (>=1.12.0)", "sphinxcontrib-spelling (>=4.0.1)"]
-pep8test = ["black", "flake8", "flake8-import-order", "pep8-naming"]
-sdist = ["setuptools_rust (>=0.11.4)"]
-ssh = ["bcrypt (>=3.1.5)"]
-test = ["pytest (>=6.2.0)", "pytest-cov", "pytest-subtests", "pytest-xdist", "pretend", "iso8601", "pytz", "hypothesis (>=1.11.4,!=3.79.2)"]
+toml = ["tomli"]
[[package]]
-name = "cssselect"
-version = "1.1.0"
-description = "cssselect parses CSS3 Selectors and translates them to XPath 1.0"
-category = "main"
-optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
-
-[[package]]
-name = "cssutils"
-version = "2.3.0"
-description = "A CSS Cascading Style Sheets library for Python"
-category = "main"
+name = "cryptography"
+version = "41.0.1"
+description = "cryptography is a package which provides cryptographic recipes and primitives to Python developers."
+category = "dev"
optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
[package.dependencies]
-importlib-metadata = {version = "*", markers = "python_version < \"3.8\""}
+cffi = ">=1.12"
[package.extras]
-docs = ["sphinx", "jaraco.packaging (>=8.2)", "rst.linker (>=1.9)"]
-testing = ["pytest (>=4.6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-cov", "pytest-enabler (>=1.0.1)", "mock", "lxml", "cssselect", "pytest-black (>=0.3.7)", "pytest-mypy", "importlib-resources"]
+docs = ["sphinx (>=5.3.0)", "sphinx-rtd-theme (>=1.1.1)"]
+docstest = ["pyenchant (>=1.6.11)", "sphinxcontrib-spelling (>=4.0.1)", "twine (>=1.12.0)"]
+nox = ["nox"]
+pep8test = ["black", "check-sdist", "mypy", "ruff"]
+sdist = ["build"]
+ssh = ["bcrypt (>=3.1.5)"]
+test = ["pretend", "pytest (>=6.2.0)", "pytest-benchmark", "pytest-cov", "pytest-xdist"]
+test-randomorder = ["pytest-randomly"]
+
+[[package]]
+name = "csscompressor"
+version = "0.9.5"
+description = "A python port of YUI CSS Compressor"
+category = "dev"
+optional = false
+python-versions = "*"
[[package]]
name = "cycler"
-version = "0.10.0"
+version = "0.11.0"
description = "Composable style cycles"
category = "main"
optional = false
-python-versions = "*"
-
-[package.dependencies]
-six = "*"
+python-versions = ">=3.6"
[[package]]
name = "decorator"
-version = "5.1.0"
+version = "5.1.1"
description = "Decorators for Humans"
category = "main"
optional = false
@@ -243,7 +236,7 @@ python-versions = ">=3.5"
[[package]]
name = "distlib"
-version = "0.3.3"
+version = "0.3.6"
description = "Distribution utilities"
category = "dev"
optional = false
@@ -251,110 +244,178 @@ python-versions = "*"
[[package]]
name = "docutils"
-version = "0.17.1"
+version = "0.20.1"
description = "Docutils -- Python Documentation Utilities"
category = "dev"
optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
+python-versions = ">=3.7"
[[package]]
name = "dotty-dict"
-version = "1.3.0"
+version = "1.3.1"
description = "Dictionary wrapper for quick access to deeply nested keys."
category = "dev"
optional = false
-python-versions = "*"
+python-versions = ">=3.5,<4.0"
-[package.dependencies]
-setuptools_scm = "*"
+[[package]]
+name = "exceptiongroup"
+version = "1.1.2"
+description = "Backport of PEP 654 (exception groups)"
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
+[package.extras]
+test = ["pytest (>=6)"]
[[package]]
-name = "emails"
-version = "0.6"
-description = "Modern python library for emails."
+name = "executing"
+version = "1.2.0"
+description = "Get the currently executing AST node of a frame, and other information"
category = "main"
optional = false
python-versions = "*"
-[package.dependencies]
-chardet = "*"
-cssutils = "*"
-lxml = "*"
-premailer = "*"
-python-dateutil = "*"
-requests = "*"
+[package.extras]
+tests = ["asttokens", "littleutils", "pytest", "rich"]
[[package]]
-name = "entrypoints"
-version = "0.3"
-description = "Discover and load entry points from installed packages."
-category = "dev"
+name = "filelock"
+version = "3.12.2"
+description = "A platform independent file lock."
+category = "main"
optional = false
-python-versions = ">=2.7"
+python-versions = ">=3.7"
+
+[package.extras]
+docs = ["furo (>=2023.5.20)", "sphinx (>=7.0.1)", "sphinx-autodoc-typehints (>=1.23,!=1.23.4)"]
+testing = ["covdefaults (>=2.3)", "coverage (>=7.2.7)", "diff-cover (>=7.5)", "pytest (>=7.3.1)", "pytest-cov (>=4.1)", "pytest-mock (>=3.10)", "pytest-timeout (>=2.1)"]
[[package]]
-name = "filelock"
-version = "3.3.0"
-description = "A platform independent file lock."
+name = "fonttools"
+version = "4.40.0"
+description = "Tools to manipulate font files"
category = "main"
optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.8"
[package.extras]
-docs = ["furo (>=2021.8.17b43)", "sphinx (>=4.1)", "sphinx-autodoc-typehints (>=1.12)"]
-testing = ["covdefaults (>=1.2.0)", "coverage (>=4)", "pytest (>=4)", "pytest-cov", "pytest-timeout (>=1.4.2)"]
+all = ["brotli (>=1.0.1)", "brotlicffi (>=0.8.0)", "fs (>=2.2.0,<3)", "lxml (>=4.0,<5)", "lz4 (>=1.7.4.2)", "matplotlib", "munkres", "scipy", "skia-pathops (>=0.5.0)", "sympy", "uharfbuzz (>=0.23.0)", "unicodedata2 (>=15.0.0)", "xattr", "zopfli (>=0.1.4)"]
+graphite = ["lz4 (>=1.7.4.2)"]
+interpolatable = ["munkres", "scipy"]
+lxml = ["lxml (>=4.0,<5)"]
+pathops = ["skia-pathops (>=0.5.0)"]
+plot = ["matplotlib"]
+repacker = ["uharfbuzz (>=0.23.0)"]
+symfont = ["sympy"]
+type1 = ["xattr"]
+ufo = ["fs (>=2.2.0,<3)"]
+unicode = ["unicodedata2 (>=15.0.0)"]
+woff = ["brotli (>=1.0.1)", "brotlicffi (>=0.8.0)", "zopfli (>=0.1.4)"]
+
+[[package]]
+name = "frozenlist"
+version = "1.3.3"
+description = "A list-like structure which implements collections.abc.MutableSequence"
+category = "main"
+optional = false
+python-versions = ">=3.7"
+
+[[package]]
+name = "ghp-import"
+version = "2.1.0"
+description = "Copy your docs directly to the gh-pages branch."
+category = "dev"
+optional = false
+python-versions = "*"
+
+[package.dependencies]
+python-dateutil = ">=2.8.1"
+
+[package.extras]
+dev = ["flake8", "markdown", "twine", "wheel"]
[[package]]
name = "gitdb"
-version = "4.0.7"
+version = "4.0.10"
description = "Git Object Database"
category = "dev"
optional = false
-python-versions = ">=3.4"
+python-versions = ">=3.7"
[package.dependencies]
-smmap = ">=3.0.1,<5"
+smmap = ">=3.0.1,<6"
[[package]]
name = "gitpython"
-version = "3.1.24"
-description = "GitPython is a python library used to interact with Git repositories"
+version = "3.1.31"
+description = "GitPython is a Python library used to interact with Git repositories"
category = "dev"
optional = false
python-versions = ">=3.7"
[package.dependencies]
gitdb = ">=4.0.1,<5"
-typing-extensions = {version = ">=3.7.4.3", markers = "python_version < \"3.10\""}
+
+[[package]]
+name = "griffe"
+version = "0.31.0"
+description = "Signatures for entire Python programs. Extract the structure, the frame, the skeleton of your project, to generate API documentation or find breaking changes in your API."
+category = "dev"
+optional = false
+python-versions = ">=3.8"
+
+[package.dependencies]
+colorama = ">=0.4"
[[package]]
name = "grpcio"
-version = "1.41.0"
+version = "1.49.1"
description = "HTTP/2-based RPC framework"
category = "main"
optional = false
-python-versions = "*"
+python-versions = ">=3.7"
[package.dependencies]
six = ">=1.5.2"
[package.extras]
-protobuf = ["grpcio-tools (>=1.41.0)"]
+protobuf = ["grpcio-tools (>=1.49.1)"]
+
+[[package]]
+name = "grpcio"
+version = "1.51.3"
+description = "HTTP/2-based RPC framework"
+category = "main"
+optional = false
+python-versions = ">=3.7"
+
+[package.extras]
+protobuf = ["grpcio-tools (>=1.51.3)"]
+
+[[package]]
+name = "htmlmin2"
+version = "0.1.13"
+description = "An HTML Minifier"
+category = "dev"
+optional = false
+python-versions = "*"
[[package]]
name = "identify"
-version = "2.3.0"
+version = "2.5.24"
description = "File identification library for Python"
category = "dev"
optional = false
-python-versions = ">=3.6.1"
+python-versions = ">=3.7"
[package.extras]
-license = ["editdistance-s"]
+license = ["ukkonen"]
[[package]]
name = "idna"
-version = "3.2"
+version = "3.4"
description = "Internationalized Domain Names in Applications (IDNA)"
category = "main"
optional = false
@@ -362,55 +423,58 @@ python-versions = ">=3.5"
[[package]]
name = "importlib-metadata"
-version = "4.8.1"
+version = "6.8.0"
description = "Read metadata from Python packages"
-category = "main"
+category = "dev"
optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.8"
[package.dependencies]
-typing-extensions = {version = ">=3.6.4", markers = "python_version < \"3.8\""}
zipp = ">=0.5"
[package.extras]
-docs = ["sphinx", "jaraco.packaging (>=8.2)", "rst.linker (>=1.9)"]
+docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
perf = ["ipython"]
-testing = ["pytest (>=4.6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-cov", "pytest-enabler (>=1.0.1)", "packaging", "pep517", "pyfakefs", "flufl.flake8", "pytest-perf (>=0.9.2)", "pytest-black (>=0.3.7)", "pytest-mypy", "importlib-resources (>=1.3)"]
+testing = ["flufl.flake8", "importlib-resources (>=1.3)", "packaging", "pyfakefs", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-mypy (>=0.9.1)", "pytest-perf (>=0.9.2)", "pytest-ruff"]
[[package]]
-name = "invoke"
-version = "1.6.0"
-description = "Pythonic task execution"
-category = "dev"
+name = "importlib-resources"
+version = "6.0.0"
+description = "Read resources from Python packages"
+category = "main"
optional = false
-python-versions = "*"
+python-versions = ">=3.8"
+
+[package.dependencies]
+zipp = {version = ">=3.1.0", markers = "python_version < \"3.10\""}
+
+[package.extras]
+docs = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
+testing = ["pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-mypy (>=0.9.1)", "pytest-ruff"]
[[package]]
-name = "ipykernel"
-version = "5.5.6"
-description = "IPython Kernel for Jupyter"
+name = "iniconfig"
+version = "2.0.0"
+description = "brain-dead simple config-ini parsing"
category = "dev"
optional = false
-python-versions = ">=3.5"
-
-[package.dependencies]
-appnope = {version = "*", markers = "platform_system == \"Darwin\""}
-ipython = ">=5.0.0"
-ipython-genutils = "*"
-jupyter-client = "*"
-tornado = ">=4.2"
-traitlets = ">=4.1.0"
+python-versions = ">=3.7"
-[package.extras]
-test = ["pytest (!=5.3.4)", "pytest-cov", "flaky", "nose", "jedi (<=0.17.2)"]
+[[package]]
+name = "invoke"
+version = "2.1.3"
+description = "Pythonic task execution"
+category = "dev"
+optional = false
+python-versions = ">=3.6"
[[package]]
name = "ipython"
-version = "7.28.0"
+version = "8.14.0"
description = "IPython: Productive Interactive Computing"
category = "main"
optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.9"
[package.dependencies]
appnope = {version = "*", markers = "sys_platform == \"darwin\""}
@@ -421,46 +485,57 @@ jedi = ">=0.16"
matplotlib-inline = "*"
pexpect = {version = ">4.3", markers = "sys_platform != \"win32\""}
pickleshare = "*"
-prompt-toolkit = ">=2.0.0,<3.0.0 || >3.0.0,<3.0.1 || >3.0.1,<3.1.0"
-pygments = "*"
-traitlets = ">=4.2"
+prompt-toolkit = ">=3.0.30,<3.0.37 || >3.0.37,<3.1.0"
+pygments = ">=2.4.0"
+stack-data = "*"
+traitlets = ">=5"
+typing-extensions = {version = "*", markers = "python_version < \"3.10\""}
[package.extras]
-all = ["Sphinx (>=1.3)", "ipykernel", "ipyparallel", "ipywidgets", "nbconvert", "nbformat", "nose (>=0.10.1)", "notebook", "numpy (>=1.17)", "pygments", "qtconsole", "requests", "testpath"]
-doc = ["Sphinx (>=1.3)"]
+all = ["black", "curio", "docrepr", "ipykernel", "ipyparallel", "ipywidgets", "matplotlib", "matplotlib (!=3.2.0)", "nbconvert", "nbformat", "notebook", "numpy (>=1.21)", "pandas", "pytest (<7)", "pytest (<7.1)", "pytest-asyncio", "qtconsole", "setuptools (>=18.5)", "sphinx (>=1.3)", "sphinx-rtd-theme", "stack-data", "testpath", "trio", "typing-extensions"]
+black = ["black"]
+doc = ["docrepr", "ipykernel", "matplotlib", "pytest (<7)", "pytest (<7.1)", "pytest-asyncio", "setuptools (>=18.5)", "sphinx (>=1.3)", "sphinx-rtd-theme", "stack-data", "testpath", "typing-extensions"]
kernel = ["ipykernel"]
nbconvert = ["nbconvert"]
nbformat = ["nbformat"]
-notebook = ["notebook", "ipywidgets"]
+notebook = ["ipywidgets", "notebook"]
parallel = ["ipyparallel"]
qtconsole = ["qtconsole"]
-test = ["nose (>=0.10.1)", "requests", "testpath", "pygments", "nbformat", "ipykernel", "numpy (>=1.17)"]
+test = ["pytest (<7.1)", "pytest-asyncio", "testpath"]
+test-extra = ["curio", "matplotlib (!=3.2.0)", "nbformat", "numpy (>=1.21)", "pandas", "pytest (<7.1)", "pytest-asyncio", "testpath", "trio"]
[[package]]
-name = "ipython-genutils"
-version = "0.2.0"
-description = "Vestigial utilities from IPython"
+name = "isort"
+version = "5.12.0"
+description = "A Python utility / library to sort Python imports."
category = "dev"
optional = false
-python-versions = "*"
+python-versions = ">=3.8.0"
+
+[package.extras]
+colors = ["colorama (>=0.4.3)"]
+pipfile-deprecated-finder = ["pip-shims (>=0.5.2)", "pipreqs", "requirementslib"]
+plugins = ["setuptools"]
+requirements-deprecated-finder = ["pip-api", "pipreqs"]
[[package]]
-name = "isort"
-version = "5.9.3"
-description = "A Python utility / library to sort Python imports."
+name = "jaraco-classes"
+version = "3.2.3"
+description = "Utility functions for Python class constructs"
category = "dev"
optional = false
-python-versions = ">=3.6.1,<4.0"
+python-versions = ">=3.7"
+
+[package.dependencies]
+more-itertools = "*"
[package.extras]
-pipfile_deprecated_finder = ["pipreqs", "requirementslib"]
-requirements_deprecated_finder = ["pipreqs", "pip-api"]
-colors = ["colorama (>=0.4.3,<0.5.0)"]
-plugins = ["setuptools"]
+docs = ["jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)"]
+testing = ["flake8 (<5)", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-flake8", "pytest-mypy (>=0.9.1)"]
[[package]]
name = "jedi"
-version = "0.18.0"
+version = "0.18.2"
description = "An autocompletion tool for Python that can be used for text editors."
category = "main"
optional = false
@@ -470,28 +545,29 @@ python-versions = ">=3.6"
parso = ">=0.8.0,<0.9.0"
[package.extras]
+docs = ["Jinja2 (==2.11.3)", "MarkupSafe (==1.1.1)", "Pygments (==2.8.1)", "alabaster (==0.7.12)", "babel (==2.9.1)", "chardet (==4.0.0)", "commonmark (==0.8.1)", "docutils (==0.17.1)", "future (==0.18.2)", "idna (==2.10)", "imagesize (==1.2.0)", "mock (==1.0.1)", "packaging (==20.9)", "pyparsing (==2.4.7)", "pytz (==2021.1)", "readthedocs-sphinx-ext (==2.1.4)", "recommonmark (==0.5.0)", "requests (==2.25.1)", "six (==1.15.0)", "snowballstemmer (==2.1.0)", "sphinx (==1.8.5)", "sphinx-rtd-theme (==0.4.3)", "sphinxcontrib-serializinghtml (==1.1.4)", "sphinxcontrib-websupport (==1.2.4)", "urllib3 (==1.26.4)"]
qa = ["flake8 (==3.8.3)", "mypy (==0.782)"]
-testing = ["Django (<3.1)", "colorama", "docopt", "pytest (<6.0.0)"]
+testing = ["Django (<3.1)", "attrs", "colorama", "docopt", "pytest (<7.0.0)"]
[[package]]
name = "jeepney"
-version = "0.7.1"
+version = "0.8.0"
description = "Low-level, pure Python DBus protocol wrapper."
category = "dev"
optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
[package.extras]
-test = ["pytest", "pytest-trio", "pytest-asyncio", "testpath", "trio", "async-timeout"]
-trio = ["trio", "async-generator"]
+test = ["async-timeout", "pytest", "pytest-asyncio (>=0.17)", "pytest-trio", "testpath", "trio"]
+trio = ["async_generator", "trio"]
[[package]]
name = "jinja2"
-version = "3.0.2"
+version = "3.1.2"
description = "A very fast and expressive template engine."
category = "main"
optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
[package.dependencies]
MarkupSafe = ">=2.0"
@@ -501,175 +577,144 @@ i18n = ["Babel (>=2.7)"]
[[package]]
name = "joblib"
-version = "1.1.0"
+version = "1.3.1"
description = "Lightweight pipelining with Python functions"
category = "main"
optional = false
-python-versions = ">=3.6"
-
-[[package]]
-name = "jsonschema"
-version = "4.1.0"
-description = "An implementation of JSON Schema validation for Python"
-category = "dev"
-optional = false
python-versions = ">=3.7"
-[package.dependencies]
-attrs = ">=17.4.0"
-importlib-metadata = {version = "*", markers = "python_version < \"3.8\""}
-pyrsistent = ">=0.14.0,<0.17.0 || >0.17.0,<0.17.1 || >0.17.1,<0.17.2 || >0.17.2"
-
-[package.extras]
-format = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3987", "uri-template", "webcolors (>=1.11)"]
-format_nongpl = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3986-validator (>0.1.0)", "uri-template", "webcolors (>=1.11)"]
-
-[[package]]
-name = "jupyter-client"
-version = "7.0.6"
-description = "Jupyter protocol implementation and client libraries"
-category = "dev"
-optional = false
-python-versions = ">=3.6.1"
-
-[package.dependencies]
-entrypoints = "*"
-jupyter-core = ">=4.6.0"
-nest-asyncio = ">=1.5"
-python-dateutil = ">=2.1"
-pyzmq = ">=13"
-tornado = ">=4.1"
-traitlets = "*"
-
-[package.extras]
-doc = ["myst-parser", "sphinx (>=1.3.6)", "sphinx-rtd-theme", "sphinxcontrib-github-alt"]
-test = ["codecov", "coverage", "ipykernel", "ipython", "mock", "mypy", "pre-commit", "pytest", "pytest-asyncio", "pytest-cov", "pytest-timeout", "jedi (<0.18)"]
-
[[package]]
-name = "jupyter-core"
-version = "4.8.1"
-description = "Jupyter core package. A base package on which Jupyter projects rely."
+name = "jsmin"
+version = "3.0.1"
+description = "JavaScript minifier."
category = "dev"
optional = false
-python-versions = ">=3.6"
-
-[package.dependencies]
-pywin32 = {version = ">=1.0", markers = "sys_platform == \"win32\" and platform_python_implementation != \"PyPy\""}
-traitlets = "*"
+python-versions = "*"
[[package]]
-name = "jupytext"
-version = "1.13.0"
-description = "Jupyter notebooks as Markdown documents, Julia, Python or R scripts"
-category = "dev"
+name = "jsonschema"
+version = "4.18.0"
+description = "An implementation of JSON Schema validation for Python"
+category = "main"
optional = false
-python-versions = "~=3.6"
+python-versions = ">=3.8"
[package.dependencies]
-markdown-it-py = ">=1.0,<2.0"
-mdit-py-plugins = "*"
-nbformat = "*"
-pyyaml = "*"
-toml = "*"
+attrs = ">=22.2.0"
+jsonschema-specifications = ">=2023.03.6"
+referencing = ">=0.28.4"
+rpds-py = ">=0.7.1"
[package.extras]
-rst2md = ["sphinx-gallery (>=0.7.0,<0.8.0)"]
-toml = ["toml"]
+format = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3987", "uri-template", "webcolors (>=1.11)"]
+format-nongpl = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3986-validator (>0.1.0)", "uri-template", "webcolors (>=1.11)"]
[[package]]
-name = "kaleido"
-version = "0.2.1"
-description = "Static image export for web-based visualization libraries with zero dependencies"
+name = "jsonschema-specifications"
+version = "2023.6.1"
+description = "The JSON Schema meta-schemas and vocabularies, exposed as a Registry"
category = "main"
optional = false
-python-versions = "*"
+python-versions = ">=3.8"
+
+[package.dependencies]
+referencing = ">=0.28.0"
[[package]]
name = "keyring"
-version = "23.2.1"
+version = "24.2.0"
description = "Store and access your passwords safely."
category = "dev"
optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.8"
[package.dependencies]
-importlib-metadata = ">=3.6"
+importlib-metadata = {version = ">=4.11.4", markers = "python_version < \"3.12\""}
+"jaraco.classes" = "*"
jeepney = {version = ">=0.4.2", markers = "sys_platform == \"linux\""}
-pywin32-ctypes = {version = "<0.1.0 || >0.1.0,<0.1.1 || >0.1.1", markers = "sys_platform == \"win32\""}
+pywin32-ctypes = {version = ">=0.2.0", markers = "sys_platform == \"win32\""}
SecretStorage = {version = ">=3.2", markers = "sys_platform == \"linux\""}
[package.extras]
-docs = ["sphinx", "jaraco.packaging (>=8.2)", "rst.linker (>=1.9)"]
-testing = ["pytest (>=4.6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-cov", "pytest-enabler (>=1.0.1)", "pytest-black (>=0.3.7)", "pytest-mypy"]
+completion = ["shtab"]
+docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
+testing = ["pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-mypy (>=0.9.1)", "pytest-ruff"]
[[package]]
name = "kiwisolver"
-version = "1.3.2"
+version = "1.4.4"
description = "A fast implementation of the Cassowary constraint solver"
category = "main"
optional = false
python-versions = ">=3.7"
[[package]]
-name = "lxml"
-version = "4.6.3"
-description = "Powerful and Pythonic XML processing library combining libxml2/libxslt with the ElementTree API."
-category = "main"
+name = "markdown"
+version = "3.3.7"
+description = "Python implementation of Markdown."
+category = "dev"
optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, != 3.4.*"
+python-versions = ">=3.6"
+
+[package.dependencies]
+importlib-metadata = {version = ">=4.4", markers = "python_version < \"3.10\""}
[package.extras]
-cssselect = ["cssselect (>=0.7)"]
-html5 = ["html5lib"]
-htmlsoup = ["beautifulsoup4"]
-source = ["Cython (>=0.29.7)"]
+testing = ["coverage", "pyyaml"]
[[package]]
name = "markdown-it-py"
-version = "1.1.0"
+version = "3.0.0"
description = "Python port of markdown-it. Markdown parsing, done right!"
-category = "dev"
+category = "main"
optional = false
-python-versions = "~=3.6"
+python-versions = ">=3.8"
[package.dependencies]
-attrs = ">=19,<22"
-typing-extensions = {version = ">=3.7.4", markers = "python_version < \"3.8\""}
+mdurl = ">=0.1,<1.0"
[package.extras]
-code_style = ["pre-commit (==2.6)"]
-compare = ["commonmark (>=0.9.1,<0.10.0)", "markdown (>=3.2.2,<3.3.0)", "mistletoe-ebp (>=0.10.0,<0.11.0)", "mistune (>=0.8.4,<0.9.0)", "panflute (>=1.12,<2.0)"]
-linkify = ["linkify-it-py (>=1.0,<2.0)"]
+benchmarking = ["psutil", "pytest", "pytest-benchmark"]
+code-style = ["pre-commit (>=3.0,<4.0)"]
+compare = ["commonmark (>=0.9,<1.0)", "markdown (>=3.4,<4.0)", "mistletoe (>=1.0,<2.0)", "mistune (>=2.0,<3.0)", "panflute (>=2.3,<3.0)"]
+linkify = ["linkify-it-py (>=1,<3)"]
plugins = ["mdit-py-plugins"]
-rtd = ["myst-nb (==0.13.0a1)", "pyyaml", "sphinx (>=2,<4)", "sphinx-copybutton", "sphinx-panels (>=0.4.0,<0.5.0)", "sphinx-book-theme"]
-testing = ["coverage", "psutil", "pytest (>=3.6,<4)", "pytest-benchmark (>=3.2,<4.0)", "pytest-cov", "pytest-regressions"]
+profiling = ["gprof2dot"]
+rtd = ["jupyter_sphinx", "mdit-py-plugins", "myst-parser", "pyyaml", "sphinx", "sphinx-copybutton", "sphinx-design", "sphinx_book_theme"]
+testing = ["coverage", "pytest", "pytest-cov", "pytest-regressions"]
[[package]]
name = "markupsafe"
-version = "2.0.1"
+version = "2.1.3"
description = "Safely add untrusted strings to HTML/XML markup."
category = "main"
optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
[[package]]
name = "matplotlib"
-version = "3.1.1"
+version = "3.7.2"
description = "Python plotting package"
category = "main"
optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.8"
[package.dependencies]
+contourpy = ">=1.0.1"
cycler = ">=0.10"
+fonttools = ">=4.22.0"
+importlib-resources = {version = ">=3.2.0", markers = "python_version < \"3.10\""}
kiwisolver = ">=1.0.1"
-numpy = ">=1.11"
-pyparsing = ">=2.0.1,<2.0.4 || >2.0.4,<2.1.2 || >2.1.2,<2.1.6 || >2.1.6"
-python-dateutil = ">=2.1"
+numpy = ">=1.20"
+packaging = ">=20.0"
+pillow = ">=6.2.0"
+pyparsing = ">=2.3.1,<3.1"
+python-dateutil = ">=2.7"
+setuptools_scm = ">=7"
[[package]]
name = "matplotlib-inline"
-version = "0.1.3"
+version = "0.1.6"
description = "Inline Matplotlib backend for Jupyter"
category = "main"
optional = false
@@ -679,136 +724,323 @@ python-versions = ">=3.5"
traitlets = "*"
[[package]]
-name = "mdit-py-plugins"
-version = "0.2.8"
-description = "Collection of plugins for markdown-it-py"
+name = "mdurl"
+version = "0.1.2"
+description = "Markdown URL utilities"
+category = "main"
+optional = false
+python-versions = ">=3.7"
+
+[[package]]
+name = "mdx-truly-sane-lists"
+version = "1.3"
+description = "Extension for Python-Markdown that makes lists truly sane. Custom indents for nested lists and fix for messy linebreaks."
+category = "dev"
+optional = false
+python-versions = "*"
+
+[package.dependencies]
+Markdown = ">=2.6"
+
+[[package]]
+name = "mergedeep"
+version = "1.3.4"
+description = "A deep merge function for đ."
+category = "dev"
+optional = false
+python-versions = ">=3.6"
+
+[[package]]
+name = "mike"
+version = "1.1.2"
+description = "Manage multiple versions of your MkDocs-powered documentation"
category = "dev"
optional = false
-python-versions = "~=3.6"
+python-versions = "*"
+
+[package.dependencies]
+jinja2 = "*"
+mkdocs = ">=1.0"
+pyyaml = ">=5.1"
+verspec = "*"
+
+[package.extras]
+dev = ["coverage", "flake8 (>=3.0)", "shtab"]
+test = ["coverage", "flake8 (>=3.0)", "shtab"]
+
+[[package]]
+name = "mkdocs"
+version = "1.4.3"
+description = "Project documentation with Markdown."
+category = "dev"
+optional = false
+python-versions = ">=3.7"
[package.dependencies]
-markdown-it-py = ">=1.0,<2.0"
+click = ">=7.0"
+colorama = {version = ">=0.4", markers = "platform_system == \"Windows\""}
+ghp-import = ">=1.0"
+importlib-metadata = {version = ">=4.3", markers = "python_version < \"3.10\""}
+jinja2 = ">=2.11.1"
+markdown = ">=3.2.1,<3.4"
+mergedeep = ">=1.3.4"
+packaging = ">=20.5"
+pyyaml = ">=5.1"
+pyyaml-env-tag = ">=0.1"
+watchdog = ">=2.0"
[package.extras]
-code_style = ["pre-commit (==2.6)"]
-rtd = ["myst-parser (==0.14.0a3)", "sphinx-book-theme (>=0.1.0,<0.2.0)"]
-testing = ["coverage", "pytest (>=3.6,<4)", "pytest-cov", "pytest-regressions"]
+i18n = ["babel (>=2.9.0)"]
+min-versions = ["babel (==2.9.0)", "click (==7.0)", "colorama (==0.4)", "ghp-import (==1.0)", "importlib-metadata (==4.3)", "jinja2 (==2.11.1)", "markdown (==3.2.1)", "markupsafe (==2.0.1)", "mergedeep (==1.3.4)", "packaging (==20.5)", "pyyaml (==5.1)", "pyyaml-env-tag (==0.1)", "typing-extensions (==3.10)", "watchdog (==2.0)"]
+
+[[package]]
+name = "mkdocs-autorefs"
+version = "0.4.1"
+description = "Automatically link across pages in MkDocs."
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
+[package.dependencies]
+Markdown = ">=3.3"
+mkdocs = ">=1.1"
+
+[[package]]
+name = "mkdocs-material"
+version = "9.1.18"
+description = "Documentation that simply works"
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
+[package.dependencies]
+colorama = ">=0.4"
+jinja2 = ">=3.0"
+markdown = ">=3.2"
+mkdocs = ">=1.4.2"
+mkdocs-material-extensions = ">=1.1"
+pygments = ">=2.14"
+pymdown-extensions = ">=9.9.1"
+regex = ">=2022.4.24"
+requests = ">=2.26"
+
+[[package]]
+name = "mkdocs-material-extensions"
+version = "1.1.1"
+description = "Extension pack for Python Markdown and MkDocs Material."
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
+[[package]]
+name = "mkdocs-minify-plugin"
+version = "0.6.4"
+description = "An MkDocs plugin to minify HTML, JS or CSS files prior to being written to disk"
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
+[package.dependencies]
+csscompressor = ">=0.9.5"
+htmlmin2 = ">=0.1.13"
+jsmin = ">=3.0.1"
+mkdocs = ">=1.4.1"
+
+[[package]]
+name = "mkdocs-redirects"
+version = "1.2.0"
+description = "A MkDocs plugin for dynamic page redirects to prevent broken links."
+category = "dev"
+optional = false
+python-versions = ">=3.6"
+
+[package.dependencies]
+mkdocs = ">=1.1.1"
+
+[package.extras]
+dev = ["autoflake", "black", "isort", "pytest", "twine (>=1.13.0)"]
+release = ["twine (>=1.13.0)"]
+test = ["autoflake", "black", "isort", "pytest"]
+
+[[package]]
+name = "mkdocstrings"
+version = "0.22.0"
+description = "Automatic documentation from sources, for MkDocs."
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
+[package.dependencies]
+importlib-metadata = {version = ">=4.6", markers = "python_version < \"3.10\""}
+Jinja2 = ">=2.11.1"
+Markdown = ">=3.3"
+MarkupSafe = ">=1.1"
+mkdocs = ">=1.2"
+mkdocs-autorefs = ">=0.3.1"
+mkdocstrings-python = {version = ">=0.5.2", optional = true, markers = "extra == \"python\""}
+pymdown-extensions = ">=6.3"
+typing-extensions = {version = ">=4.1", markers = "python_version < \"3.10\""}
+
+[package.extras]
+crystal = ["mkdocstrings-crystal (>=0.3.4)"]
+python = ["mkdocstrings-python (>=0.5.2)"]
+python-legacy = ["mkdocstrings-python-legacy (>=0.2.1)"]
+
+[[package]]
+name = "mkdocstrings-python"
+version = "1.1.2"
+description = "A Python handler for mkdocstrings."
+category = "dev"
+optional = false
+python-versions = ">=3.7"
+
+[package.dependencies]
+griffe = ">=0.24"
+mkdocstrings = ">=0.20"
+
+[[package]]
+name = "more-itertools"
+version = "9.1.0"
+description = "More routines for operating on iterables, beyond itertools"
+category = "dev"
+optional = false
+python-versions = ">=3.7"
[[package]]
name = "mpmath"
-version = "1.2.1"
+version = "1.3.0"
description = "Python library for arbitrary-precision floating-point arithmetic"
category = "main"
optional = false
python-versions = "*"
[package.extras]
-develop = ["pytest (>=4.6)", "pycodestyle", "pytest-cov", "codecov", "wheel"]
+develop = ["codecov", "pycodestyle", "pytest (>=4.6)", "pytest-cov", "wheel"]
+docs = ["sphinx"]
+gmpy = ["gmpy2 (>=2.1.0a4)"]
tests = ["pytest (>=4.6)"]
[[package]]
name = "msgpack"
-version = "1.0.2"
-description = "MessagePack (de)serializer."
+version = "1.0.5"
+description = "MessagePack serializer"
category = "main"
optional = false
python-versions = "*"
[[package]]
-name = "mypy-extensions"
-version = "0.4.3"
-description = "Experimental type system extensions for programs checked with the mypy typechecker."
-category = "dev"
-optional = false
-python-versions = "*"
-
-[[package]]
-name = "nbformat"
-version = "5.1.3"
-description = "The Jupyter Notebook format"
+name = "mypy"
+version = "1.4.1"
+description = "Optional static typing for Python"
category = "dev"
optional = false
-python-versions = ">=3.5"
+python-versions = ">=3.7"
[package.dependencies]
-ipython-genutils = "*"
-jsonschema = ">=2.4,<2.5.0 || >2.5.0"
-jupyter-core = "*"
-traitlets = ">=4.1"
+mypy-extensions = ">=1.0.0"
+tomli = {version = ">=1.1.0", markers = "python_version < \"3.11\""}
+typing-extensions = ">=4.1.0"
[package.extras]
-fast = ["fastjsonschema"]
-test = ["check-manifest", "fastjsonschema", "testpath", "pytest", "pytest-cov"]
+dmypy = ["psutil (>=4.0)"]
+install-types = ["pip"]
+python2 = ["typed-ast (>=1.4.0,<2)"]
+reports = ["lxml"]
[[package]]
-name = "nest-asyncio"
-version = "1.5.1"
-description = "Patch asyncio to allow nested event loops"
+name = "mypy-extensions"
+version = "1.0.0"
+description = "Type system extensions for programs checked with the mypy type checker."
category = "dev"
optional = false
python-versions = ">=3.5"
[[package]]
name = "networkx"
-version = "2.6.3"
+version = "3.1"
description = "Python package for creating and manipulating graphs and networks"
category = "main"
optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
[package.extras]
-default = ["numpy (>=1.19)", "scipy (>=1.5,!=1.6.1)", "matplotlib (>=3.3)", "pandas (>=1.1)"]
-developer = ["black (==21.5b1)", "pre-commit (>=2.12)"]
-doc = ["sphinx (>=4.0,<5.0)", "pydata-sphinx-theme (>=0.6,<1.0)", "sphinx-gallery (>=0.9,<1.0)", "numpydoc (>=1.1)", "pillow (>=8.2)", "nb2plots (>=0.6)", "texext (>=0.6.6)"]
-extra = ["lxml (>=4.5)", "pygraphviz (>=1.7)", "pydot (>=1.4.1)"]
-test = ["pytest (>=6.2)", "pytest-cov (>=2.12)", "codecov (>=2.1)"]
+default = ["matplotlib (>=3.4)", "numpy (>=1.20)", "pandas (>=1.3)", "scipy (>=1.8)"]
+developer = ["mypy (>=1.1)", "pre-commit (>=3.2)"]
+doc = ["nb2plots (>=0.6)", "numpydoc (>=1.5)", "pillow (>=9.4)", "pydata-sphinx-theme (>=0.13)", "sphinx (>=6.1)", "sphinx-gallery (>=0.12)", "texext (>=0.6.7)"]
+extra = ["lxml (>=4.6)", "pydot (>=1.4.2)", "pygraphviz (>=1.10)", "sympy (>=1.10)"]
+test = ["codecov (>=2.1)", "pytest (>=7.2)", "pytest-cov (>=4.0)"]
[[package]]
name = "nodeenv"
-version = "1.6.0"
+version = "1.8.0"
description = "Node.js virtual environment builder"
category = "dev"
optional = false
-python-versions = "*"
+python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,!=3.6.*"
+
+[package.dependencies]
+setuptools = "*"
[[package]]
name = "numpy"
-version = "1.21.1"
-description = "NumPy is the fundamental package for array computing with Python."
+version = "1.25.0"
+description = "Fundamental package for array computing in Python"
category = "main"
optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.9"
[[package]]
name = "packaging"
-version = "21.0"
+version = "23.1"
description = "Core utilities for Python packages"
-category = "dev"
+category = "main"
optional = false
-python-versions = ">=3.6"
-
-[package.dependencies]
-pyparsing = ">=2.0.2"
+python-versions = ">=3.7"
[[package]]
name = "pandas"
-version = "1.3.3"
+version = "2.0.3"
description = "Powerful data structures for data analysis, time series, and statistics"
category = "main"
optional = false
-python-versions = ">=3.7.1"
+python-versions = ">=3.8"
[package.dependencies]
-numpy = ">=1.17.3"
-python-dateutil = ">=2.7.3"
-pytz = ">=2017.3"
+numpy = [
+ {version = ">=1.20.3", markers = "python_version < \"3.10\""},
+ {version = ">=1.21.0", markers = "python_version >= \"3.10\""},
+ {version = ">=1.23.2", markers = "python_version >= \"3.11\""},
+]
+python-dateutil = ">=2.8.2"
+pytz = ">=2020.1"
+tzdata = ">=2022.1"
[package.extras]
-test = ["hypothesis (>=3.58)", "pytest (>=6.0)", "pytest-xdist"]
+all = ["PyQt5 (>=5.15.1)", "SQLAlchemy (>=1.4.16)", "beautifulsoup4 (>=4.9.3)", "bottleneck (>=1.3.2)", "brotlipy (>=0.7.0)", "fastparquet (>=0.6.3)", "fsspec (>=2021.07.0)", "gcsfs (>=2021.07.0)", "html5lib (>=1.1)", "hypothesis (>=6.34.2)", "jinja2 (>=3.0.0)", "lxml (>=4.6.3)", "matplotlib (>=3.6.1)", "numba (>=0.53.1)", "numexpr (>=2.7.3)", "odfpy (>=1.4.1)", "openpyxl (>=3.0.7)", "pandas-gbq (>=0.15.0)", "psycopg2 (>=2.8.6)", "pyarrow (>=7.0.0)", "pymysql (>=1.0.2)", "pyreadstat (>=1.1.2)", "pytest (>=7.3.2)", "pytest-asyncio (>=0.17.0)", "pytest-xdist (>=2.2.0)", "python-snappy (>=0.6.0)", "pyxlsb (>=1.0.8)", "qtpy (>=2.2.0)", "s3fs (>=2021.08.0)", "scipy (>=1.7.1)", "tables (>=3.6.1)", "tabulate (>=0.8.9)", "xarray (>=0.21.0)", "xlrd (>=2.0.1)", "xlsxwriter (>=1.4.3)", "zstandard (>=0.15.2)"]
+aws = ["s3fs (>=2021.08.0)"]
+clipboard = ["PyQt5 (>=5.15.1)", "qtpy (>=2.2.0)"]
+compression = ["brotlipy (>=0.7.0)", "python-snappy (>=0.6.0)", "zstandard (>=0.15.2)"]
+computation = ["scipy (>=1.7.1)", "xarray (>=0.21.0)"]
+excel = ["odfpy (>=1.4.1)", "openpyxl (>=3.0.7)", "pyxlsb (>=1.0.8)", "xlrd (>=2.0.1)", "xlsxwriter (>=1.4.3)"]
+feather = ["pyarrow (>=7.0.0)"]
+fss = ["fsspec (>=2021.07.0)"]
+gcp = ["gcsfs (>=2021.07.0)", "pandas-gbq (>=0.15.0)"]
+hdf5 = ["tables (>=3.6.1)"]
+html = ["beautifulsoup4 (>=4.9.3)", "html5lib (>=1.1)", "lxml (>=4.6.3)"]
+mysql = ["SQLAlchemy (>=1.4.16)", "pymysql (>=1.0.2)"]
+output-formatting = ["jinja2 (>=3.0.0)", "tabulate (>=0.8.9)"]
+parquet = ["pyarrow (>=7.0.0)"]
+performance = ["bottleneck (>=1.3.2)", "numba (>=0.53.1)", "numexpr (>=2.7.1)"]
+plot = ["matplotlib (>=3.6.1)"]
+postgresql = ["SQLAlchemy (>=1.4.16)", "psycopg2 (>=2.8.6)"]
+spss = ["pyreadstat (>=1.1.2)"]
+sql-other = ["SQLAlchemy (>=1.4.16)"]
+test = ["hypothesis (>=6.34.2)", "pytest (>=7.3.2)", "pytest-asyncio (>=0.17.0)", "pytest-xdist (>=2.2.0)"]
+xml = ["lxml (>=4.6.3)"]
[[package]]
name = "parso"
-version = "0.8.2"
+version = "0.8.3"
description = "A Python Parser"
category = "main"
optional = false
@@ -818,13 +1050,21 @@ python-versions = ">=3.6"
qa = ["flake8 (==3.8.3)", "mypy (==0.782)"]
testing = ["docopt", "pytest (<6.0.0)"]
+[[package]]
+name = "pastel"
+version = "0.2.1"
+description = "Bring colors to your terminal."
+category = "dev"
+optional = false
+python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
+
[[package]]
name = "pathspec"
-version = "0.9.0"
+version = "0.11.1"
description = "Utility library for gitignore style pattern matching of file paths."
category = "dev"
optional = false
-python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,>=2.7"
+python-versions = ">=3.7"
[[package]]
name = "pexpect"
@@ -847,101 +1087,119 @@ python-versions = "*"
[[package]]
name = "pillow"
-version = "8.3.2"
+version = "10.0.0"
description = "Python Imaging Library (Fork)"
category = "main"
optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.8"
+
+[package.extras]
+docs = ["furo", "olefile", "sphinx (>=2.4)", "sphinx-copybutton", "sphinx-inline-tabs", "sphinx-removed-in", "sphinxext-opengraph"]
+tests = ["check-manifest", "coverage", "defusedxml", "markdown2", "olefile", "packaging", "pyroma", "pytest", "pytest-cov", "pytest-timeout"]
[[package]]
name = "pkginfo"
-version = "1.7.1"
-description = "Query metadatdata from sdists / bdists / installed packages."
+version = "1.9.6"
+description = "Query metadata from sdists / bdists / installed packages."
category = "dev"
optional = false
-python-versions = "*"
+python-versions = ">=3.6"
[package.extras]
-testing = ["nose", "coverage"]
+testing = ["pytest", "pytest-cov"]
[[package]]
name = "platformdirs"
-version = "2.4.0"
-description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"."
+version = "3.8.1"
+description = "A small Python package for determining appropriate platform-specific dirs, e.g. a \"user data dir\"."
category = "dev"
optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
[package.extras]
-docs = ["Sphinx (>=4)", "furo (>=2021.7.5b38)", "proselint (>=0.10.2)", "sphinx-autodoc-typehints (>=1.12)"]
-test = ["appdirs (==1.4.4)", "pytest (>=6)", "pytest-cov (>=2.7)", "pytest-mock (>=3.6)"]
+docs = ["furo (>=2023.5.20)", "proselint (>=0.13)", "sphinx (>=7.0.1)", "sphinx-autodoc-typehints (>=1.23,!=1.23.4)"]
+test = ["appdirs (==1.4.4)", "covdefaults (>=2.3)", "pytest (>=7.3.1)", "pytest-cov (>=4.1)", "pytest-mock (>=3.10)"]
[[package]]
name = "plotly"
-version = "4.14.3"
+version = "5.15.0"
description = "An open-source, interactive data visualization library for Python"
category = "main"
optional = false
-python-versions = "*"
+python-versions = ">=3.6"
[package.dependencies]
-retrying = ">=1.3.3"
-six = "*"
+packaging = "*"
+tenacity = ">=6.2.0"
[[package]]
-name = "pre-commit"
-version = "2.15.0"
-description = "A framework for managing and maintaining multi-language pre-commit hooks."
+name = "pluggy"
+version = "1.2.0"
+description = "plugin and hook calling mechanisms for python"
category = "dev"
optional = false
-python-versions = ">=3.6.1"
+python-versions = ">=3.7"
+
+[package.extras]
+dev = ["pre-commit", "tox"]
+testing = ["pytest", "pytest-benchmark"]
+
+[[package]]
+name = "poethepoet"
+version = "0.20.0"
+description = "A task runner that works well with poetry."
+category = "dev"
+optional = false
+python-versions = ">=3.8"
[package.dependencies]
-cfgv = ">=2.0.0"
-identify = ">=1.0.0"
-importlib-metadata = {version = "*", markers = "python_version < \"3.8\""}
-nodeenv = ">=0.11.1"
-pyyaml = ">=5.1"
-toml = "*"
-virtualenv = ">=20.0.8"
+pastel = ">=0.2.1,<0.3.0"
+tomli = ">=1.2.2"
+
+[package.extras]
+poetry-plugin = ["poetry (>=1.0,<2.0)"]
[[package]]
-name = "premailer"
-version = "3.10.0"
-description = "Turns CSS blocks into style attributes"
-category = "main"
+name = "pprintpp"
+version = "0.4.0"
+description = "A drop-in replacement for pprint that's actually pretty"
+category = "dev"
optional = false
python-versions = "*"
-[package.dependencies]
-cachetools = "*"
-cssselect = "*"
-cssutils = "*"
-lxml = "*"
-requests = "*"
+[[package]]
+name = "pre-commit"
+version = "3.3.3"
+description = "A framework for managing and maintaining multi-language pre-commit hooks."
+category = "dev"
+optional = false
+python-versions = ">=3.8"
-[package.extras]
-dev = ["tox", "twine", "therapist", "black", "flake8", "wheel"]
-test = ["nose", "mock"]
+[package.dependencies]
+cfgv = ">=2.0.0"
+identify = ">=1.0.0"
+nodeenv = ">=0.11.1"
+pyyaml = ">=5.1"
+virtualenv = ">=20.10.0"
[[package]]
name = "prompt-toolkit"
-version = "3.0.20"
+version = "3.0.39"
description = "Library for building powerful interactive command lines in Python"
category = "main"
optional = false
-python-versions = ">=3.6.2"
+python-versions = ">=3.7.0"
[package.dependencies]
wcwidth = "*"
[[package]]
name = "protobuf"
-version = "3.18.1"
-description = "Protocol Buffers"
+version = "4.23.4"
+description = ""
category = "main"
optional = false
-python-versions = ">=3.5"
+python-versions = ">=3.7"
[[package]]
name = "ptyprocess"
@@ -952,90 +1210,120 @@ optional = false
python-versions = "*"
[[package]]
-name = "py"
-version = "1.10.0"
-description = "library with cross-python path, ini-parsing, io, code, log facilities"
-category = "dev"
+name = "pure-eval"
+version = "0.2.2"
+description = "Safely evaluate AST nodes without side effects"
+category = "main"
optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
+python-versions = "*"
+
+[package.extras]
+tests = ["pytest"]
[[package]]
name = "pycparser"
-version = "2.20"
+version = "2.21"
description = "C parser in Python"
category = "dev"
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
[[package]]
-name = "pydot"
-version = "1.4.2"
-description = "Python interface to Graphviz's Dot"
+name = "pygments"
+version = "2.15.1"
+description = "Pygments is a syntax highlighting package written in Python."
category = "main"
optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
+python-versions = ">=3.7"
-[package.dependencies]
-pyparsing = ">=2.1.4"
+[package.extras]
+plugins = ["importlib-metadata"]
[[package]]
-name = "pydotplus"
-version = "2.0.2"
-description = "Python interface to Graphviz's Dot language"
-category = "main"
+name = "pymdown-extensions"
+version = "10.0.1"
+description = "Extension pack for Python Markdown."
+category = "dev"
optional = false
-python-versions = "*"
+python-versions = ">=3.7"
[package.dependencies]
-pyparsing = ">=2.0.1"
+markdown = ">=3.2"
+pyyaml = "*"
[[package]]
-name = "pygments"
-version = "2.10.0"
-description = "Pygments is a syntax highlighting package written in Python."
+name = "pyparsing"
+version = "3.0.9"
+description = "pyparsing module - Classes and methods to define and execute parsing grammars"
category = "main"
optional = false
-python-versions = ">=3.5"
+python-versions = ">=3.6.8"
+
+[package.extras]
+diagrams = ["jinja2", "railroad-diagrams"]
[[package]]
-name = "PyINSECT"
-version = "0.0.39"
-description = ""
-category = "main"
+name = "pytest"
+version = "7.4.0"
+description = "pytest: simple powerful testing with Python"
+category = "dev"
optional = false
-python-versions = ">= 3.6"
-develop = false
+python-versions = ">=3.7"
[package.dependencies]
-networkx = ">=2.5.1"
-pydot = ">=1.4.2"
-pydotplus = ">=2.0.2"
+colorama = {version = "*", markers = "sys_platform == \"win32\""}
+exceptiongroup = {version = ">=1.0.0rc8", markers = "python_version < \"3.11\""}
+iniconfig = "*"
+packaging = "*"
+pluggy = ">=0.12,<2.0"
+tomli = {version = ">=1.0.0", markers = "python_version < \"3.11\""}
[package.extras]
-dev = ["flake8", "isort", "black", "pre-commit", "concurrent-log-handler"]
-viz = ["pygraphviz (>=1.7)", "matplotlib (<=3.1.1)"]
+testing = ["argcomplete", "attrs (>=19.2.0)", "hypothesis (>=3.56)", "mock", "nose", "pygments (>=2.7.2)", "requests", "setuptools", "xmlschema"]
+
+[[package]]
+name = "pytest-clarity"
+version = "1.0.1"
+description = "A plugin providing an alternative, colourful diff output for failing assertions."
+category = "dev"
+optional = false
+python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
-[package.source]
-type = "git"
-url = "https://github.com/ggianna/PyINSECT.git"
-reference = "master"
-resolved_reference = "517cc6e51b6aeaa93772af0fd7bb75a7f240b1a3"
+[package.dependencies]
+pprintpp = ">=0.4.0"
+pytest = ">=3.5.0"
+rich = ">=8.0.0"
[[package]]
-name = "pyparsing"
-version = "2.4.7"
-description = "Python parsing module"
-category = "main"
+name = "pytest-cov"
+version = "4.1.0"
+description = "Pytest plugin for measuring coverage."
+category = "dev"
optional = false
-python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*"
+python-versions = ">=3.7"
+
+[package.dependencies]
+coverage = {version = ">=5.2.1", extras = ["toml"]}
+pytest = ">=4.6"
+
+[package.extras]
+testing = ["fields", "hunter", "process-tests", "pytest-xdist", "six", "virtualenv"]
[[package]]
-name = "pyrsistent"
-version = "0.18.0"
-description = "Persistent/Functional/Immutable data structures"
+name = "pytest-sugar"
+version = "0.9.7"
+description = "pytest-sugar is a plugin for pytest that changes the default look and feel of pytest (e.g. progressbar, show tests that fail instantly)."
category = "dev"
optional = false
-python-versions = ">=3.6"
+python-versions = "*"
+
+[package.dependencies]
+packaging = ">=21.3"
+pytest = ">=6.2.0"
+termcolor = ">=2.1.0"
+
+[package.extras]
+dev = ["black", "flake8", "pre-commit"]
[[package]]
name = "python-dateutil"
@@ -1050,23 +1338,23 @@ six = ">=1.5"
[[package]]
name = "python-gitlab"
-version = "2.10.1"
+version = "3.15.0"
description = "Interact with GitLab API"
category = "dev"
optional = false
-python-versions = ">=3.6.0"
+python-versions = ">=3.7.0"
[package.dependencies]
requests = ">=2.25.0"
-requests-toolbelt = ">=0.9.1"
+requests-toolbelt = ">=0.10.1"
[package.extras]
-autocompletion = ["argcomplete (>=1.10.0,<2)"]
+autocompletion = ["argcomplete (>=1.10.0,<3)"]
yaml = ["PyYaml (>=5.2)"]
[[package]]
name = "python-semantic-release"
-version = "7.19.2"
+version = "7.34.6"
description = "Automatic Semantic Versioning for Python projects"
category = "dev"
optional = false
@@ -1077,106 +1365,104 @@ click = ">=7,<9"
click-log = ">=0.3,<1"
dotty-dict = ">=1.3.0,<2"
gitpython = ">=3.0.8,<4"
-invoke = ">=1.4.1,<2"
-python-gitlab = ">=1.10,<3"
+invoke = ">=1.4.1,<3"
+packaging = "*"
+python-gitlab = ">=2,<4"
requests = ">=2.25,<3"
semver = ">=2.10,<3"
-tomlkit = "0.7.0"
+tomlkit = ">=0.10,<1.0"
twine = ">=3,<4"
+wheel = "*"
[package.extras]
-dev = ["tox", "isort", "black"]
-docs = ["Sphinx (==1.3.6)"]
+dev = ["black", "isort", "tox"]
+docs = ["Jinja2 (==3.0.3)", "Sphinx (==1.8.6)"]
mypy = ["mypy", "types-requests"]
-test = ["coverage (>=5,<6)", "pytest (>=5,<6)", "pytest-xdist (>=1,<2)", "pytest-mock (>=2,<3)", "responses (==0.13.3)", "mock (==1.3.0)"]
+test = ["coverage (>=5,<6)", "mock (==1.3.0)", "pytest (>=7,<8)", "pytest-mock (>=2,<3)", "pytest-xdist (>=1,<2)", "responses (==0.13.3)"]
[[package]]
name = "pytz"
-version = "2021.3"
+version = "2023.3"
description = "World timezone definitions, modern and historical"
category = "main"
optional = false
python-versions = "*"
-[[package]]
-name = "pywin32"
-version = "302"
-description = "Python for Window Extensions"
-category = "dev"
-optional = false
-python-versions = "*"
-
[[package]]
name = "pywin32-ctypes"
-version = "0.2.0"
-description = ""
+version = "0.2.2"
+description = "A (partial) reimplementation of pywin32 using ctypes/cffi"
category = "dev"
optional = false
-python-versions = "*"
+python-versions = ">=3.6"
[[package]]
name = "pyyaml"
-version = "5.4.1"
+version = "6.0"
description = "YAML parser and emitter for Python"
category = "main"
optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*"
+python-versions = ">=3.6"
[[package]]
-name = "pyzmq"
-version = "22.3.0"
-description = "Python bindings for 0MQ"
+name = "pyyaml-env-tag"
+version = "0.1"
+description = "A custom YAML tag for referencing environment variables in YAML files. "
category = "dev"
optional = false
python-versions = ">=3.6"
[package.dependencies]
-cffi = {version = "*", markers = "implementation_name == \"pypy\""}
-py = {version = "*", markers = "implementation_name == \"pypy\""}
+pyyaml = "*"
[[package]]
name = "ray"
-version = "1.7.0"
+version = "2.5.1"
description = "Ray provides a simple, universal API for building distributed applications."
category = "main"
optional = false
python-versions = "*"
[package.dependencies]
+aiosignal = "*"
attrs = "*"
click = ">=7.0"
filelock = "*"
-grpcio = ">=1.28.1"
-msgpack = ">=1.0.0,<2.0.0"
-numpy = [
- {version = ">=1.16", markers = "python_version < \"3.9\""},
- {version = ">=1.19.3", markers = "python_version >= \"3.9\""},
+frozenlist = "*"
+grpcio = [
+ {version = ">=1.32.0,<=1.51.3", markers = "python_version < \"3.10\" and sys_platform != \"darwin\""},
+ {version = ">=1.32.0,<=1.49.1", markers = "python_version < \"3.10\" and sys_platform == \"darwin\""},
+ {version = ">=1.42.0,<=1.51.3", markers = "python_version >= \"3.10\" and sys_platform != \"darwin\""},
+ {version = ">=1.42.0,<=1.49.1", markers = "python_version >= \"3.10\" and sys_platform == \"darwin\""},
]
-pandas = {version = "*", optional = true, markers = "extra == \"tune\""}
-protobuf = ">=3.15.3"
+jsonschema = "*"
+msgpack = ">=1.0.0,<2.0.0"
+numpy = {version = ">=1.19.3", markers = "python_version >= \"3.9\""}
+packaging = "*"
+protobuf = ">=3.15.3,<3.19.5 || >3.19.5"
pyyaml = "*"
-redis = ">=3.5.0"
-requests = {version = "*", optional = true, markers = "extra == \"tune\""}
-tabulate = {version = "*", optional = true, markers = "extra == \"tune\""}
-tensorboardX = {version = ">=1.9", optional = true, markers = "extra == \"tune\""}
+requests = "*"
[package.extras]
-all = ["tensorboardX (>=1.9)", "aiohttp", "starlette", "dm-tree", "requests", "kubernetes", "matplotlib (!=3.4.3)", "aioredis (<2)", "uvicorn", "fastapi", "gym", "scikit-image", "pandas", "tabulate", "pyyaml", "jsonschema", "gpustat", "scipy", "opentelemetry-api (==1.1.0)", "colorful", "prometheus-client (>=0.7.1)", "opentelemetry-sdk (==1.1.0)", "lz4", "aiohttp-cors", "py-spy (>=0.2.0)", "ray-cpp (==1.7.0)", "opencensus", "opentelemetry-exporter-otlp (==1.1.0)", "urllib3"]
-cpp = ["ray-cpp (==1.7.0)"]
-default = ["aiohttp", "aiohttp-cors", "aioredis (<2)", "colorful", "py-spy (>=0.2.0)", "jsonschema", "requests", "gpustat", "opencensus", "prometheus-client (>=0.7.1)"]
+air = ["aiohttp (>=3.7)", "aiohttp-cors", "aiorwlock", "colorful", "fastapi", "fsspec", "gpustat (>=1.0.0)", "numpy (>=1.20)", "opencensus", "pandas", "pandas (>=1.3)", "prometheus-client (>=0.7.1)", "py-spy (>=0.2.0)", "pyarrow (>=6.0.1)", "pydantic", "requests", "smart-open", "starlette", "tensorboardX (>=1.9)", "uvicorn", "virtualenv (>=20.0.24,<20.21.1)"]
+all = ["aiohttp (>=3.7)", "aiohttp-cors", "aiorwlock", "colorful", "dm-tree", "fastapi", "fsspec", "gpustat (>=1.0.0)", "gymnasium (==0.26.3)", "kubernetes", "lz4", "numpy (>=1.20)", "opencensus", "opentelemetry-api", "opentelemetry-exporter-otlp", "opentelemetry-sdk", "pandas", "pandas (>=1.3)", "prometheus-client (>=0.7.1)", "py-spy (>=0.2.0)", "pyarrow (>=6.0.1)", "pydantic", "pyyaml", "ray-cpp (==2.5.1)", "requests", "rich", "scikit-image", "scipy", "smart-open", "starlette", "tensorboardX (>=1.9)", "typer", "urllib3", "uvicorn", "virtualenv (>=20.0.24,<20.21.1)"]
+cpp = ["ray-cpp (==2.5.1)"]
+data = ["fsspec", "numpy (>=1.20)", "pandas (>=1.3)", "pyarrow (>=6.0.1)"]
+default = ["aiohttp (>=3.7)", "aiohttp-cors", "colorful", "gpustat (>=1.0.0)", "opencensus", "prometheus-client (>=0.7.1)", "py-spy (>=0.2.0)", "pydantic", "requests", "smart-open", "virtualenv (>=20.0.24,<20.21.1)"]
k8s = ["kubernetes", "urllib3"]
-observability = ["opentelemetry-api (==1.1.0)", "opentelemetry-sdk (==1.1.0)", "opentelemetry-exporter-otlp (==1.1.0)"]
-rllib = ["pandas", "tabulate", "tensorboardX (>=1.9)", "requests", "dm-tree", "gym", "lz4", "matplotlib (!=3.4.3)", "scikit-image", "pyyaml", "scipy"]
-serve = ["uvicorn", "requests", "starlette", "fastapi"]
-tune = ["pandas", "tabulate", "tensorboardX (>=1.9)", "requests"]
+observability = ["opentelemetry-api", "opentelemetry-exporter-otlp", "opentelemetry-sdk"]
+rllib = ["dm-tree", "gymnasium (==0.26.3)", "lz4", "pandas", "pyarrow (>=6.0.1)", "pyyaml", "requests", "rich", "scikit-image", "scipy", "tensorboardX (>=1.9)", "typer"]
+serve = ["aiohttp (>=3.7)", "aiohttp-cors", "aiorwlock", "colorful", "fastapi", "gpustat (>=1.0.0)", "opencensus", "prometheus-client (>=0.7.1)", "py-spy (>=0.2.0)", "pydantic", "requests", "smart-open", "starlette", "uvicorn", "virtualenv (>=20.0.24,<20.21.1)"]
+train = ["pandas", "pyarrow (>=6.0.1)", "requests", "tensorboardX (>=1.9)"]
+tune = ["pandas", "pyarrow (>=6.0.1)", "requests", "tensorboardX (>=1.9)"]
[[package]]
name = "readme-renderer"
-version = "30.0"
+version = "40.0"
description = "readme_renderer is a library for rendering \"readme\" descriptions for Warehouse"
category = "dev"
optional = false
-python-versions = "*"
+python-versions = ">=3.8"
[package.dependencies]
bleach = ">=2.1.0"
@@ -1184,129 +1470,138 @@ docutils = ">=0.13.1"
Pygments = ">=2.5.1"
[package.extras]
-md = ["cmarkgfm (>=0.5.0,<0.7.0)"]
+md = ["cmarkgfm (>=0.8.0)"]
[[package]]
-name = "redis"
-version = "3.5.3"
-description = "Python client for Redis key-value store"
+name = "referencing"
+version = "0.29.1"
+description = "JSON Referencing + Python"
category = "main"
optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
+python-versions = ">=3.8"
-[package.extras]
-hiredis = ["hiredis (>=0.1.3)"]
+[package.dependencies]
+attrs = ">=22.2.0"
+rpds-py = ">=0.7.0"
[[package]]
name = "regex"
-version = "2021.10.8"
+version = "2023.6.3"
description = "Alternative regular expression module, to replace re."
category = "dev"
optional = false
-python-versions = "*"
+python-versions = ">=3.6"
[[package]]
name = "requests"
-version = "2.26.0"
+version = "2.31.0"
description = "Python HTTP for Humans."
category = "main"
optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*"
+python-versions = ">=3.7"
[package.dependencies]
certifi = ">=2017.4.17"
-charset-normalizer = {version = ">=2.0.0,<2.1.0", markers = "python_version >= \"3\""}
-idna = {version = ">=2.5,<4", markers = "python_version >= \"3\""}
-urllib3 = ">=1.21.1,<1.27"
+charset-normalizer = ">=2,<4"
+idna = ">=2.5,<4"
+urllib3 = ">=1.21.1,<3"
[package.extras]
-socks = ["PySocks (>=1.5.6,!=1.5.7)", "win-inet-pton"]
-use_chardet_on_py3 = ["chardet (>=3.0.2,<5)"]
+socks = ["PySocks (>=1.5.6,!=1.5.7)"]
+use-chardet-on-py3 = ["chardet (>=3.0.2,<6)"]
[[package]]
name = "requests-toolbelt"
-version = "0.9.1"
+version = "1.0.0"
description = "A utility belt for advanced users of python-requests"
category = "dev"
optional = false
-python-versions = "*"
+python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
[package.dependencies]
requests = ">=2.0.1,<3.0.0"
-[[package]]
-name = "retrying"
-version = "1.3.3"
-description = "Retrying"
-category = "main"
-optional = false
-python-versions = "*"
-
-[package.dependencies]
-six = ">=1.7.0"
-
[[package]]
name = "rfc3986"
-version = "1.5.0"
+version = "2.0.0"
description = "Validating URI References per RFC 3986"
category = "dev"
optional = false
-python-versions = "*"
+python-versions = ">=3.7"
[package.extras]
idna2008 = ["idna"]
[[package]]
name = "rich"
-version = "10.12.0"
+version = "13.4.2"
description = "Render rich text, tables, progress bars, syntax highlighting, markdown and more to the terminal"
category = "main"
optional = false
-python-versions = ">=3.6.2,<4.0.0"
+python-versions = ">=3.7.0"
[package.dependencies]
-colorama = ">=0.4.0,<0.5.0"
-commonmark = ">=0.9.0,<0.10.0"
-pygments = ">=2.6.0,<3.0.0"
-typing-extensions = {version = ">=3.7.4,<4.0.0", markers = "python_version < \"3.8\""}
+markdown-it-py = ">=2.2.0"
+pygments = ">=2.13.0,<3.0.0"
[package.extras]
-jupyter = ["ipywidgets (>=7.5.1,<8.0.0)"]
+jupyter = ["ipywidgets (>=7.5.1,<9)"]
+
+[[package]]
+name = "rpds-py"
+version = "0.8.10"
+description = "Python bindings to Rust's persistent data structures (rpds)"
+category = "main"
+optional = false
+python-versions = ">=3.8"
+
+[[package]]
+name = "ruff"
+version = "0.0.277"
+description = "An extremely fast Python linter, written in Rust."
+category = "dev"
+optional = false
+python-versions = ">=3.7"
[[package]]
name = "scikit-learn"
-version = "1.0"
+version = "1.3.0"
description = "A set of python modules for machine learning and data mining"
category = "main"
optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
[package.dependencies]
-joblib = ">=0.11"
-numpy = ">=1.14.6"
-scipy = ">=1.1.0"
+joblib = ">=1.1.1"
+numpy = ">=1.17.3"
+scipy = ">=1.5.0"
threadpoolctl = ">=2.0.0"
[package.extras]
-benchmark = ["matplotlib (>=2.2.2)", "pandas (>=0.25.0)", "memory-profiler (>=0.57.0)"]
-docs = ["matplotlib (>=2.2.2)", "scikit-image (>=0.14.5)", "pandas (>=0.25.0)", "seaborn (>=0.9.0)", "memory-profiler (>=0.57.0)", "sphinx (>=4.0.1)", "sphinx-gallery (>=0.7.0)", "numpydoc (>=1.0.0)", "Pillow (>=7.1.2)", "sphinx-prompt (>=1.3.0)", "sphinxext-opengraph (>=0.4.2)"]
-examples = ["matplotlib (>=2.2.2)", "scikit-image (>=0.14.5)", "pandas (>=0.25.0)", "seaborn (>=0.9.0)"]
-tests = ["matplotlib (>=2.2.2)", "scikit-image (>=0.14.5)", "pandas (>=0.25.0)", "pytest (>=5.0.1)", "pytest-cov (>=2.9.0)", "flake8 (>=3.8.2)", "black (>=21.6b0)", "mypy (>=0.770)", "pyamg (>=4.0.0)"]
+benchmark = ["matplotlib (>=3.1.3)", "memory-profiler (>=0.57.0)", "pandas (>=1.0.5)"]
+docs = ["Pillow (>=7.1.2)", "matplotlib (>=3.1.3)", "memory-profiler (>=0.57.0)", "numpydoc (>=1.2.0)", "pandas (>=1.0.5)", "plotly (>=5.14.0)", "pooch (>=1.6.0)", "scikit-image (>=0.16.2)", "seaborn (>=0.9.0)", "sphinx (>=6.0.0)", "sphinx-copybutton (>=0.5.2)", "sphinx-gallery (>=0.10.1)", "sphinx-prompt (>=1.3.0)", "sphinxext-opengraph (>=0.4.2)"]
+examples = ["matplotlib (>=3.1.3)", "pandas (>=1.0.5)", "plotly (>=5.14.0)", "pooch (>=1.6.0)", "scikit-image (>=0.16.2)", "seaborn (>=0.9.0)"]
+tests = ["black (>=23.3.0)", "matplotlib (>=3.1.3)", "mypy (>=1.3)", "numpydoc (>=1.2.0)", "pandas (>=1.0.5)", "pooch (>=1.6.0)", "pyamg (>=4.0.0)", "pytest (>=7.1.2)", "pytest-cov (>=2.9.0)", "ruff (>=0.0.272)", "scikit-image (>=0.16.2)"]
[[package]]
name = "scipy"
-version = "1.6.1"
-description = "SciPy: Scientific Library for Python"
+version = "1.9.3"
+description = "Fundamental algorithms for scientific computing in Python"
category = "main"
optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
[package.dependencies]
-numpy = ">=1.16.5"
+numpy = ">=1.18.5,<1.26.0"
+
+[package.extras]
+dev = ["flake8", "mypy", "pycodestyle", "typing_extensions"]
+doc = ["matplotlib (>2)", "numpydoc", "pydata-sphinx-theme (==0.9.0)", "sphinx (!=4.1.0)", "sphinx-panels (>=0.5.2)", "sphinx-tabs"]
+test = ["asv", "gmpy2", "mpmath", "pytest", "pytest-cov", "pytest-xdist", "scikit-umfpack", "threadpoolctl"]
[[package]]
name = "secretstorage"
-version = "3.3.1"
+version = "3.3.3"
description = "Python bindings to FreeDesktop.org Secret Service API"
category = "dev"
optional = false
@@ -1324,20 +1619,36 @@ category = "dev"
optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
+[[package]]
+name = "setuptools"
+version = "68.0.0"
+description = "Easily download, build, install, upgrade, and uninstall Python packages"
+category = "main"
+optional = false
+python-versions = ">=3.7"
+
+[package.extras]
+docs = ["furo", "jaraco.packaging (>=9)", "jaraco.tidelift (>=1.4)", "pygments-github-lexers (==0.0.5)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-favicon", "sphinx-hoverxref (<2)", "sphinx-inline-tabs", "sphinx-lint", "sphinx-notfound-page (==0.8.3)", "sphinx-reredirects", "sphinxcontrib-towncrier"]
+testing = ["build[virtualenv]", "filelock (>=3.4.0)", "flake8-2020", "ini2toml[lite] (>=0.9)", "jaraco.envs (>=2.2)", "jaraco.path (>=3.2.0)", "pip (>=19.1)", "pip-run (>=8.8)", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-mypy (>=0.9.1)", "pytest-perf", "pytest-ruff", "pytest-timeout", "pytest-xdist", "tomli-w (>=1.0.0)", "virtualenv (>=13.0.0)", "wheel"]
+testing-integration = ["build[virtualenv]", "filelock (>=3.4.0)", "jaraco.envs (>=2.2)", "jaraco.path (>=3.2.0)", "pytest", "pytest-enabler", "pytest-xdist", "tomli", "virtualenv (>=13.0.0)", "wheel"]
+
[[package]]
name = "setuptools-scm"
-version = "6.3.2"
+version = "7.1.0"
description = "the blessed package to manage your versions by scm tags"
-category = "dev"
+category = "main"
optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
[package.dependencies]
packaging = ">=20.0"
-tomli = ">=1.0.0"
+setuptools = "*"
+tomli = {version = ">=1.0.0", markers = "python_version < \"3.11\""}
+typing-extensions = "*"
[package.extras]
-toml = ["setuptools (>=42)", "tomli (>=1.0.0)"]
+test = ["pytest (>=6.2)", "virtualenv (>20)"]
+toml = ["setuptools (>=42)"]
[[package]]
name = "six"
@@ -1348,132 +1659,128 @@ optional = false
python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*"
[[package]]
-name = "sklearn"
-version = "0.0"
-description = "A set of python modules for machine learning and data mining"
+name = "smmap"
+version = "5.0.0"
+description = "A pure Python implementation of a sliding window memory map manager"
+category = "dev"
+optional = false
+python-versions = ">=3.6"
+
+[[package]]
+name = "stack-data"
+version = "0.6.2"
+description = "Extract data from python stack frames and tracebacks for informative displays"
category = "main"
optional = false
python-versions = "*"
[package.dependencies]
-scikit-learn = "*"
+asttokens = ">=2.1.0"
+executing = ">=1.2.0"
+pure-eval = "*"
-[[package]]
-name = "smmap"
-version = "4.0.0"
-description = "A pure Python implementation of a sliding window memory map manager"
-category = "dev"
-optional = false
-python-versions = ">=3.5"
+[package.extras]
+tests = ["cython", "littleutils", "pygments", "pytest", "typeguard"]
[[package]]
name = "sympy"
-version = "1.9"
+version = "1.12"
description = "Computer algebra system (CAS) in Python"
category = "main"
optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.8"
[package.dependencies]
mpmath = ">=0.19"
[[package]]
-name = "tabulate"
-version = "0.8.9"
-description = "Pretty-print tabular data"
+name = "tenacity"
+version = "8.2.2"
+description = "Retry code until it succeeds"
category = "main"
optional = false
-python-versions = "*"
+python-versions = ">=3.6"
[package.extras]
-widechars = ["wcwidth"]
+doc = ["reno", "sphinx", "tornado (>=4.5)"]
[[package]]
-name = "tensorboardx"
-version = "2.4"
-description = "TensorBoardX lets you watch Tensors Flow without Tensorflow"
-category = "main"
+name = "termcolor"
+version = "2.3.0"
+description = "ANSI color formatting for output in terminal"
+category = "dev"
optional = false
-python-versions = "*"
+python-versions = ">=3.7"
-[package.dependencies]
-numpy = "*"
-protobuf = ">=3.8.0"
+[package.extras]
+tests = ["pytest", "pytest-cov"]
[[package]]
name = "threadpoolctl"
-version = "3.0.0"
+version = "3.1.0"
description = "threadpoolctl"
category = "main"
optional = false
python-versions = ">=3.6"
-[[package]]
-name = "toml"
-version = "0.10.2"
-description = "Python Library for Tom's Obvious, Minimal Language"
-category = "dev"
-optional = false
-python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*"
-
[[package]]
name = "tomli"
-version = "1.2.1"
+version = "2.0.1"
description = "A lil' TOML parser"
-category = "dev"
+category = "main"
optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
[[package]]
name = "tomlkit"
-version = "0.7.0"
+version = "0.11.8"
description = "Style preserving TOML library"
category = "dev"
optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
+python-versions = ">=3.7"
[[package]]
name = "torch"
-version = "1.9.1"
+version = "2.0.1"
description = "Tensors and Dynamic neural networks in Python with strong GPU acceleration"
category = "main"
optional = false
-python-versions = ">=3.6.2"
+python-versions = ">=3.8.0"
[package.dependencies]
+filelock = "*"
+jinja2 = "*"
+networkx = "*"
+sympy = "*"
typing-extensions = "*"
+[package.extras]
+opt-einsum = ["opt-einsum (>=3.3)"]
+
[[package]]
name = "torchvision"
-version = "0.10.1"
+version = "0.15.2"
description = "image and video datasets and models for torch deep learning"
category = "main"
optional = false
-python-versions = "*"
+python-versions = ">=3.8"
[package.dependencies]
numpy = "*"
-pillow = ">=5.3.0"
-torch = "1.9.1"
+pillow = ">=5.3.0,<8.3.0 || >=8.4.0"
+requests = "*"
+torch = "2.0.1"
[package.extras]
scipy = ["scipy"]
-[[package]]
-name = "tornado"
-version = "6.1"
-description = "Tornado is a Python web framework and asynchronous networking library, originally developed at FriendFeed."
-category = "dev"
-optional = false
-python-versions = ">= 3.5"
-
[[package]]
name = "tqdm"
-version = "4.62.3"
+version = "4.65.0"
description = "Fast, Extensible Progress Meter"
category = "main"
optional = false
-python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,>=2.7"
+python-versions = ">=3.7"
[package.dependencies]
colorama = {version = "*", markers = "platform_system == \"Windows\""}
@@ -1481,22 +1788,24 @@ colorama = {version = "*", markers = "platform_system == \"Windows\""}
[package.extras]
dev = ["py-make (>=0.1.0)", "twine", "wheel"]
notebook = ["ipywidgets (>=6)"]
+slack = ["slack-sdk"]
telegram = ["requests"]
[[package]]
name = "traitlets"
-version = "5.1.0"
+version = "5.9.0"
description = "Traitlets Python configuration system"
category = "main"
optional = false
python-versions = ">=3.7"
[package.extras]
-test = ["pytest"]
+docs = ["myst-parser", "pydata-sphinx-theme", "sphinx"]
+test = ["argcomplete (>=2.0)", "pre-commit", "pytest", "pytest-mock"]
[[package]]
name = "twine"
-version = "3.4.2"
+version = "3.8.0"
description = "Collection of utilities for publishing packages on PyPI"
category = "dev"
optional = false
@@ -1506,65 +1815,86 @@ python-versions = ">=3.6"
colorama = ">=0.4.3"
importlib-metadata = ">=3.6"
keyring = ">=15.1"
-pkginfo = ">=1.4.2"
+pkginfo = ">=1.8.1"
readme-renderer = ">=21.0"
requests = ">=2.20"
requests-toolbelt = ">=0.8.0,<0.9.0 || >0.9.0"
rfc3986 = ">=1.4.0"
tqdm = ">=4.14"
+urllib3 = ">=1.26.0"
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diff --git a/pyproject.toml b/pyproject.toml
index ad11319..6ad282a 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -1,57 +1,244 @@
-[tool.poetry]
-name = "roughml"
-version = "4.7.0"
-description = "A nanorough surface super-resolution framework"
-authors = ["billsioros