From 0c92c39f05e68f54b9bafecf8453309aa92d4a0a Mon Sep 17 00:00:00 2001
From: Charles Tapley Hoyt <cthoyt@gmail.com>
Date: Mon, 1 Oct 2018 16:31:40 +0200
Subject: [PATCH] Update build

---
 .travis.yml |  9 +++---
 Dockerfile  |  1 -
 doc8.ini    |  2 ++
 tox.ini     | 80 +++++++++++++++++++++++++++--------------------------
 4 files changed, 48 insertions(+), 44 deletions(-)
 create mode 100644 doc8.ini

diff --git a/.travis.yml b/.travis.yml
index 990b662..ef48c3d 100644
--- a/.travis.yml
+++ b/.travis.yml
@@ -16,7 +16,9 @@ jobs:
     - stage: lint
       env: TOXENV=manifest
     - env: TOXENV=flake8
-    - env: TOXENV=pylint
+    - env: TOXENV=pyroma
+    - env: TOXENV=xenon
+    - env: TOXENV=vulture
     # docs stage
     - stage: docs
       env: TOXENV=doc8
@@ -28,9 +30,8 @@ jobs:
 
 matrix:
   allow_failures:
-      - env: TOXENV=pylint
-      - env: TOXENV=doc8
-      - env: TOXENV=docs
+      - env: TOXENV=xenon
+      - env: TOXENV=vulture
 
 install:
     - sh -c 'if [ "$TOXENV" = "py" ]; then pip install tox codecov; else pip install tox; fi'
diff --git a/Dockerfile b/Dockerfile
index 2673419..a28b391 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -1,4 +1,3 @@
-
 # 1. Build with: docker build -t bio2bel/mirbase .
 # 2. Run with docker run -p 5000:5000 bio2bel/mirbase (-p maps the port)
 FROM python:3.7.0
diff --git a/doc8.ini b/doc8.ini
new file mode 100644
index 0000000..509a0a7
--- /dev/null
+++ b/doc8.ini
@@ -0,0 +1,2 @@
+[doc8]
+max-line-length = 120
diff --git a/tox.ini b/tox.ini
index 2849457..ca6a8a9 100644
--- a/tox.ini
+++ b/tox.ini
@@ -1,27 +1,20 @@
-# Tox (http://tox.testrun.org/) is a tool for running tests
-# in multiple virtualenvs. This configuration file will run the
-# test suite on all supported python versions. To use it, "pip install tox"
-# and then run "tox" from this directory.
-
 [tox]
 envlist =
-    # always keep coverage-clean first
     coverage-clean
-    # code linters/stylers
     manifest
     flake8
-    # pylint
-    # documentation linters/checkers
-    # doc8
+    vulture
+    xenon
+    pyroma
     readme
-    # docs
-    # the actual tests
+    doc8
+    docs
     py
-    # always keep coverage-report last
     coverage-report
 
 [testenv]
-commands = coverage run -p -m pytest --durations=20 {posargs:tests}
+commands = coverage run -p -m pytest tests {posargs}
+passenv = TRAVIS CI
 deps =
     coverage
     pytest
@@ -45,32 +38,38 @@ basepython = python3
 skip_install = true
 deps =
     flake8
-    flake8-bandit
-    flake8-colors
-    flake8-docstrings
-    flake8-import-order
+    flake8-docstrings>=0.2.7
+    flake8-import-order>=0.9
     pep8-naming
+    flake8-colors
 commands =
     flake8 src/bio2bel_mirbase/ tests/ setup.py
-description = Run the flake8 tool with several plugins (bandit, docstrings, import order, pep8 naming).
 
-[testenv:pylint]
-basepython = python3
-deps =
-    pyflakes
-    pylint
-commands =
-    pylint src/bio2bel_mirbase
+[testenv:vulture]
+deps = vulture
+skip_install = true
+commands = vulture src/bio2bel_mirbase/
+description = Run the vulture tool to look for dead code.
 
-[testenv:doc8]
-basepython = python3
+[testenv:xenon]
+deps = xenon
+skip_install = true
+commands = xenon --max-average A --max-modules A --max-absolute B .
+description = Run the xenon tool to monitor code complexity.
+
+[testenv:mypy]
+deps = mypy
 skip_install = true
+commands = mypy --ignore-missing-imports src/bio2bel_mirbase/
+description = Run the mypy tool to check static typing on the project.
+
+[testenv:pyroma]
 deps =
-    sphinx
-    doc8
-commands =
-    doc8 docs/source/ README.rst
-description = Run the doc8 tool to check the style of the RST files in the project docs.
+    pygments
+    pyroma
+skip_install = true
+commands = pyroma --min=10 .
+description = Run the pyroma tool to check the project's package friendliness.
 
 [testenv:readme]
 commands = rst-lint README.rst
@@ -84,7 +83,6 @@ changedir = docs
 deps =
     sphinx
     sphinx_rtd_theme
-    sphinx-click
 commands =
     mkdir -p {envtmpdir}
     cp -r source {envtmpdir}/source
@@ -93,6 +91,15 @@ commands =
     cat {envtmpdir}/build/coverage/c.txt
     cat {envtmpdir}/build/coverage/python.txt
 
+[testenv:doc8]
+basepython = python3
+skip_install = true
+deps =
+    sphinx
+    doc8
+commands =
+    doc8 docs/source/ README.rst
+
 [testenv:coverage-report]
 deps = coverage
 skip_install = true
@@ -132,15 +139,10 @@ commands =
 [testenv:finish]
 basepython = python3
 skip_install = true
-whitelist_externals =
-    /bin/git
-    /usr/local/bin/git
 deps =
-    {[testenv:build]deps}
     {[testenv:release]deps}
     bumpversion
 commands =
-    {[testenv:build]commands}
     bumpversion release
     {[testenv:release]commands}
     git push