New Binning Evaluation Interface

[pbelmann]

Bioboxes should provide a new interface for binning evaluation tools like the already existing assembler, assembly benchmark and binning biobox.

This issue should be closed when there is

• A new binning evaluation rfc.
• A validator for testing the implementation the binning evaluation bioboxes.
• At least one example implementing the interface.

[pbelmann]

The new binning evaluation spec introduces two different interfaces: Taxonomic and unsupervised.

It also introduces new features:

• Use key, value pairs instead of lists

---
version: NUMBER.NUMBER.NUMBER
arguments:
  sequences:
    path: STRING
    id: STRING
    type: contig
    format: bioboxes.org:/fasta
  labels:
    path: STRING
    id: STRING
    type: binning
    format: bioboxes.org:/binning/binning:0.9/taxbinning

instead of

---
version: NUMBER.NUMBER.NUMBER
arguments:
  - sequences:
     path: STRING
     id: STRING
     type: contig
     format: bioboxes.org:/fasta
  - labels:
     path: STRING
     id: STRING
     type: binning
     format: bioboxes.org:/binning/binning:0.9/taxbinning

• The syntax of the input is now defined by the "format" tag. This allows us to use a semantic term appropriate for a specific interface independent of the inputs syntax.
• '/bbx/mnt/' is now used for 'input', 'output' instead of e.g. '/bbx/input'