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tiny_dbsnp.vcf
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tiny_dbsnp.vcf
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##fileformat=VCFv4.1
##phasing=none
##INDIVIDUAL=TRUTH
##SAMPLE=<ID=TRUTH,Individual="TRUTH",Description="bamsurgeon spike-in">
##INFO=<ID=CIPOS,Number=2,Type=Integer,Description="Confidence interval around POS for imprecise variants">
##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description="Imprecise structural variation">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##INFO=<ID=SVLEN,Number=.,Type=Integer,Description="Difference in length between REF and ALT alleles">
##INFO=<ID=SOMATIC,Number=0,Type=Flag,Description="Somatic mutation in primary">
##INFO=<ID=VAF,Number=1,Type=Float,Description="Variant Allele Frequency">
##INFO=<ID=DPR,Number=1,Type=Float,Description="Avg Depth in Region (+/- 1bp)">
##INFO=<ID=MATEID,Number=1,Type=String,Description="Breakend mate">
##ALT=<ID=INV,Description="Inversion">
##ALT=<ID=DUP,Description="Duplication">
##ALT=<ID=DEL,Description="Deletion">
##ALT=<ID=INS,Description="Insertion">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT SPIKEIN
1 14062 rs000 T A 100 PASS SOMATIC;VAF=0.333333333333;DPR=5.0 GT 0/1
1 24700 rs001 T C 100 PASS SOMATIC;VAF=0.333333333333;DPR=6.0 GT 0/1
1 223356 rs002 T C 100 PASS SOMATIC;VAF=0.4;DPR=5.0 GT 0/1