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array job size broken in newest version #36

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jerowe opened this issue Jul 20, 2018 · 1 comment
Open

array job size broken in newest version #36

jerowe opened this issue Jul 20, 2018 · 1 comment
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@jerowe
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jerowe commented Jul 20, 2018

max_array_size does not work when also using commands_per_node

@jerowe jerowe added the bug label Jul 20, 2018
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jerowe commented Jul 20, 2018

This is because it will create the indices based on each task. array:1-20000:100 with 200 tasks * 100 commands per node, and this is not a valid slurm command.

Instead we will have to export a skip_index variable array:1-200, and invoke hpcrunner.pl execute_job --skip_index 100.

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