Dependency Dashboard

[renovate]

This issue lists Renovate updates and detected dependencies. Read the Dependency Dashboard docs to learn more.

Config Migration Needed

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Rate-Limited

These updates are currently rate-limited. Click on a checkbox below to force their creation now.

• Update actions/checkout action to v4
• Update actions/setup-go action to v5
• Update actions/setup-java action to v4
• Update dependency cython to v3
• Update dependency ubuntu to v24
• Update docker/build-push-action action to v6
• Update docker/login-action action to v3
• Update docker/setup-buildx-action action to v3
• 🔐 Create all rate-limited PRs at once 🔐

Edited/Blocked

These updates have been manually edited so Renovate will no longer make changes. To discard all commits and start over, click on a checkbox.

• Update dependency amici to <=0.28.0
• Update dependency libroadrunner to <2.7.1

Open

These updates have all been created already. Click a checkbox below to force a retry/rebase of any.

• Update dependency numpy to v1 [SECURITY]
• Update python Docker tag to v3.11
• Update actions/cache action to v4
• Click on this checkbox to rebase all open PRs at once

Detected dependencies

dockerfile

Dockerfile

Dockerfile-base

• python 3.9-slim-buster

github-actions

.github/workflows/buildDockerImage.yml

• actions/checkout v3
• docker/setup-buildx-action v1
• actions/cache v2
• docker/login-action v1
• docker/build-push-action v2
• docker/build-push-action v2
• actions/create-release v1
• ubuntu 20.04

.github/workflows/validateCommitSimulator.yml

• actions/setup-java v3
• actions/setup-go v3
• actions/checkout v3
• GabrielBB/xvfb-action v1
• mxschmitt/action-tmate v3
• actions/upload-artifact v4
• ubuntu 22.04

pipenv

Dockerfile-assets/Pipfile

• biosimulators-utils >=0.1.166
• numpy <1.22.0
• amici <=0.11.21
• biosimulators-amici >=0.1.22
• biosimulators-bionetgen >=0.1.20
• biosimulators-boolnet >=0.1.18
• sympy !=1.8,!=1.9
• biosimulators-cbmpy >=0.1.14
• biosimulators-cobrapy >=0.1.23
• biosimulators-copasi >=0.1.34
• biosimulators-gillespy2 >=0.1.37
• biosimulators-ginsim >=0.0.9
• biosimulators-libsbmlsim >=0.0.6
• biosimulators-masspy >=0.0.9
• cython <3
• biosimulators-pysces >=0.1.25
• biosimulators-pyneuroml >=0.0.16
• biosimulators-rbapy >=0.0.4
• smoldyn >=2.67
• libroadrunner <2.2.0
• biosimulators-tellurium >=0.1.25
• biosimulators-xpp >=0.0.12

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