geo

Regions

1. USACanada
2. SouthAmerica
3. Europe
4. India
5. NorthChina
6. SouthChina
7. JapanKorea
8. SoutheastAsia
9. Oceania

Asymmetric phylogeographic analysis

XMLs are built using the supplied Rakefile.

Results can be seen in individual directories.

Primary (large) datasets

• h3_large
• h1_large
• vic_large
• yam_large

Subsampled (small) datasets

• h3_small
• h1_small
• vic_small
• yam_small

Summary figures

Trees

Geographic histories

Maps

Grids

Persistence

Persistence correlation

Amalgamated persistence

Regional trees H3N2

Regional trees H1N1

Regional trees Vic

Regional trees Yam

Full histories

Small trees

Fsts

type	Fst
h3_small	0.29
h1_small	0.35
vic_small	0.36
yam_small	0.37
h3_large	0.30
h1_large	0.36
vic_large	0.37
yam_large	0.36