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Required improvements #1

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glatard opened this issue Jun 7, 2019 · 0 comments
Open

Required improvements #1

glatard opened this issue Jun 7, 2019 · 0 comments

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@glatard
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glatard commented Jun 7, 2019

Here is a list of Boutiques features which are currently not covered in the tutorial:

  • Tests: should be added to Section "Publishing your own tool". To be adapted from Section "Tests" in https://github.com/boutiques/boutiques/blob/0.5.20/README.md
  • Workflow engines: there could be examples of Boutiques tool usage with Nipype, Clowdr, and Spark. @ValHayot wrote examples for Nipype and Spark. @gkiar could help adding an example with Clowdr.
  • Web platforms: we could refer to the integration of Boutiques in CBRAIN, VIP, Brainlife.
  • The full Python API (not just bosh) should be documented (Document Python API boutiques#254) and referred to.
  • Add an example to import BIDS apps
  • Add an example with argparse (current section isn't really an example)
  • Add a CWL example
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