LogOrganizer.py

__author__  = "Jan-Simon Baasner"
__email__   = "janbaas@cebitec.uni-bielefeld.de"


from enum import Enum, unique


@unique
class LogEnums (Enum):
	VCF_FORMAT_CHECK_LOG = "VCF_FORMAT_CHECK_LOG".lower()
	TRANSCRIPT_CDS_CREATION_LOG = "TRANSCRIPT_CDS_CREATION_LOG".lower()
	TRANSCRIPT_BUGHUNTING_LOG =  "TRANSCRIPT_BUGHUNTING_LOG".lower()
	TRANSCRIPT_ADDITIONAL_INFO_LOG = "TRANSCRIPT_ADDITIONAL_INFO_LOG".lower()
	COORDINATOR_COMPLETE_CHECK_LOG = "COORDINATOR_COMPLETE_CHECK_LOG".lower()
	COORDINATOR_COMPLETE_CHECK_CRITICAL_LOG = "COORDINATOR_COMPLETE_CHECK_CRITICAL_LOG".lower()
	COORDINATOR_FASTA_FILE_ERROR_LOG = "COORDINATOR_FASTA_FILE_ERROR_LOG".lower()
	COORDINATOR_BUGHUNTING_LOG = "COORDINATOR_BUGHUNTING_LOG".lower()
	COORDINATOR_PHASING_LOG = "COORDINATOR_PHASING_LOG".lower()
	COORDINATOR_VARIANT_LOG = "COORDINATOR_VARIANT_LOG".lower()
	COORDINATOR_TRANSCRIPT_LOG = "COORDINATOR_TRANSCRIPT_LOG".lower()
	CONVERTER_LOG = "CONVERTER_LOG".lower()

class LogOrganizer:

	log = {}

	@staticmethod
	def addToLog(LogName: LogEnums, text: str):
		if "\n" not in text:
			text += "\n"
		if str(LogName.value) in LogOrganizer.log:
			LogOrganizer.log[str(LogName.value)].append(text)
		else:
			LogOrganizer.log[str(LogName.value)] = [text]

	@staticmethod
	def writeAllLogs(outpath:str):
		for key in LogOrganizer.log.keys():
			logdata = open(str(outpath)+str(key)+".log","w")
			logdata.write("".join(LogOrganizer.log[key]))
			logdata.close()