From 44e3f9d550eacb1063fa6afdb6be5d8357f2d8cf Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Johannes=20K=C3=B6ster?= Date: Mon, 28 Aug 2023 12:21:06 +0200 Subject: [PATCH] Add bioconda to readme --- README.md | 6 +++++- 1 file changed, 5 insertions(+), 1 deletion(-) diff --git a/README.md b/README.md index 6010766..bb5c415 100644 --- a/README.md +++ b/README.md @@ -2,6 +2,8 @@ [![Actions Status](https://github.com/brentp/somalier/workflows/Docker%20Image%20CI/badge.svg)](https://github.com/brentp/somalier/actions) [![Cite](https://img.shields.io/badge/cite-genome%20medicine-blue)](https://genomemedicine.biomedcentral.com/articles/10.1186/s13073-020-00761-2) +[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/somalier/README.html) + ## Quick Start `somalier` makes checking any number of samples for identity easy **directly from the alignments** or from jointly-called VCFs: @@ -174,7 +176,9 @@ To create a set of new sites, use `somalier find-sites` on a population VCF. Mor ## Install -get a static binary from [here](https://github.com/brentp/somalier/releases) +Somalier is available via bioconda, see [here](https://bioconda.github.io/recipes/somalier/README.html). + +Alternatively, you can get a static binary from [here](https://github.com/brentp/somalier/releases). Users can also get a docker image [here](https://hub.docker.com/r/brentp/somalier/tags) which contains htslib and a somalier binary ready-for-use.