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setup.py
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from setuptools import setup
def readme():
with open('README.md') as f:
return f.read()
setup(name='congas',
version='0.0.77',
description='Copy Number genotyping from single cell RNA sequencing',
url='https://github.com/Militeee/congas',
author='Salvatore Milite',
author_email='[email protected]',
license='GPL-3.0',
packages=['congas', 'congas.models', 'congas.building_blocks'],
install_requires=[
'matplotlib>=3.1',
'pandas>=1.0',
'pyro-ppl>=1.5',
'numpy>=1.18',
'scikit-learn',
],
include_package_data=True,
long_description=readme(),
classifiers=[
'Development Status :: 3 - Alpha',
'License :: OSI Approved :: GNU General Public License v3 (GPLv3)',
'Programming Language :: Python :: 3.7',
'Topic :: Scientific/Engineering :: Bio-Informatics'
],
keywords='scRNA scDNA RNA CNV CNA Cancer Copy-number Bioinformatics',
test_suite='nose.collector',
tests_require=['nose'],
zip_safe=False)