DESCRIPTION

Package: lineaGT
Type: Package
Title: lineaGT
Version: 0.1.0
Author: Elena Buscaroli
Maintainer: Elena Buscaroli <ele.buscaroli@gmail.com>
Authors@R: c(
    person("Elena", "Buscaroli", role=c("aut", "cre"), email="ele.buscaroli@gmail.com"),
    person("Giulio", "Caravagna", role=c("aut"), email="gcaravagn@gmail.com")
    )
Description: This package provides algorithms for multi-lineage inference from 
  vector integration sites and somatic mutations during gene therapy. The package
  acts as an interface, implemented through reticulate, to the pyLineaGT Python 
  package that provides the main inference algorithms; this package also provides
  visualisation and data input/output functions.
License: GNU
Encoding: UTF-8
LazyData: true
Imports:
    reticulate,
    tidyr,
    dplyr,
    ggmuller,
    magrittr,
    purrr,
    MASS,
    ggplot2,
    reshape2,
    stringr,
    tibble,
    VIBER,
    Polychrome,
    easypar,
    patchwork,
    ctree,
    ggraph,
    ggh4x,
    RColorBrewer,
    R.utils
Remotes:
    caravagn/VIBER,
    caravagn/easypar,
    caravagn/ctree
Suggests: 
    knitr, 
    rmarkdown
VignetteBuilder: knitr
Depends: R (>= 3.6.0)
RoxygenNote: 7.2.3
URL: https://github.com/caravagnalab/lineaGT,
    https://caravagnalab.github.io/lineaGT/