.gitignore

*.idea
*.so
*.csv
*.pyc
*.so
*.dylib
*.info
*.petsc_mat
*.petsc_vec
*.xmf
*.h5
*.egg-info
*~
data*txt
*.log
*.out
*.dat
*.cmd
*.ele
*.face
*.node
*.poly
*.bak
*.log.*
*.swp
install_*
config_*
build/
darwin/
linux2/
garnet.gnu/
Cygwin
proteus.egg-info/
proteus/subsurfaceTransportFunctions.c
cygwin_bootstrap.done
matlab_setup.done
dist/
tmp/

timeHistory.txt

# Generated files

proteus/BoundaryConditions.cpp
proteus/Isosurface.c
proteus/WaveTools.cpp
proteus/cSubsurfaceTransportCoefficients.cpp
proteus/cTwophaseDarcyCoefficients.cpp
proteus/canalyticalSolutions.c
proteus/cfemIntegrals.c
proteus/clapack.c
proteus/cmeshTools.cpp
proteus/cnumericalFlux.c
proteus/cpartitioning.cpp
proteus/cpostprocessing.c
proteus/cpskRelations.cpp
proteus/cshockCapturing.c
proteus/csmoothers.c
proteus/csparsity.cpp
proteus/csubgridError.c
proteus/ctimeIntegration.c
proteus/ctransportCoefficients.c
proteus/equivalent_polynomials.cpp
proteus/fenton/Fenton.cpp
proteus/flcbdfWrappers.cpp
proteus/mbd/CouplingFSI.cpp
proteus/MeshAdaptPUMI/Adapter.cpp
proteus/mprans/BoundaryConditions.cpp
proteus/mprans/MeshSmoothing.cpp
proteus/mprans/cAddedMass.cpp
proteus/mprans/cCLSVOF.cpp
proteus/mprans/cGN_SW2DCV.cpp
proteus/mprans/cMCorr3P.cpp
proteus/mprans/cMoveMeshMonitor.cpp
proteus/mprans/cNCLS3P.cpp
proteus/mprans/cPres.cpp
proteus/mprans/cPresInc.cpp
proteus/mprans/cPresInit.cpp
proteus/mprans/cRANS3PF.cpp
proteus/mprans/cRANS3PSed.cpp
proteus/mprans/cVOF3P.cpp
proteus/mprans/cVOS3P.cpp
proteus/superluWrappers.c
proteus/MeshAdaptPUMI/MeshAdapt.cpp
proteus/tests/ci/meshNoVessel.edge
proteus/tests/ci/meshNoVessel.neigh