diff --git a/R/ShiftingMethods.R b/R/ShiftingMethods.R index 98c5f34..6a1ad58 100644 --- a/R/ShiftingMethods.R +++ b/R/ShiftingMethods.R @@ -304,14 +304,14 @@ setMethod( "scoreShift", "CAGEexp" ## adjust colnames for columns in temp_df2 colnames(temp_df2) <- paste(c("pvalue.KS", "fdr.KS"), group_x_str, group_y_str, sep=".") - temp_df <- cbind.DataFrame(temp_df, temp_df2) + temp_df <- cbind(temp_df, temp_df2) } prior_rowdata <- rowData(consensusClustersSE(object)) - use_df <- cbind.DataFrame(prior_rowdata, temp_df) + use_df <- cbind(prior_rowdata, temp_df) ## manage duplicate columns use_df <- use_df[ , !duplicated(colnames(use_df))]