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exportToTrack crashes when a CTSS object does not not contain filteredCTSSidx information. #83

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charles-plessy opened this issue Jun 29, 2023 · 0 comments
Open

exportToTrack crashes when a CTSS object does not not contain filteredCTSSidx information. #83

charles-plessy opened this issue Jun 29, 2023 · 0 comments
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@charles-plessy
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This happens when the CAGEexp object was freshly created and never has been clustered.

The solution is to put some kind of guard statement near

    object$itemRgb <- ifelse(object$filteredCTSSidx, "black", "grey50")

Maybe something like if(is.null(object$filteredCTSSidx)) object$filteredCTSSidx <- Rle(TRUE)
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