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M1-M12-cutadapt.sh
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M1-M12-cutadapt.sh
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##M1
nohup cutadapt -j 5 -m 5 --fasta -u 4 -u -6 M1.extendedFrags.collapse.fa.gz -o M1.cutadapt.extendedFrags.collapse.cutBarcodes.fa.gz &> M1.cutadapt.log &
##M2
nohup cutadapt -j 5 -m 5 --fasta -u 4 -u -6 M2.extendedFrags.collapse.fa.gz -o M2.cutadapt.extendedFrags.collapse.cutBarcodes.fa.gz &> M2.cutadapt.log &
##M3
nohup cutadapt -j 5 -m 5 --fasta -u 4 -u -6 M3.extendedFrags.collapse.fa.gz -o M3.cutadapt.extendedFrags.collapse.cutBarcodes.fa.gz &> M3.cutadapt.log &
##M4
nohup cutadapt -j 5 -m 5 --fasta -u 4 -u -6 M4.extendedFrags.collapse.fa.gz -o M4.cutadapt.extendedFrags.collapse.cutBarcodes.fa.gz &> M4.cutadapt.log &
##M5
nohup cutadapt -j 5 -m 5 --fasta -u 4 -u -6 M5.extendedFrags.collapse.fa.gz -o M5.cutadapt.extendedFrags.collapse.cutBarcodes.fa.gz &> M5.cutadapt.log &
##M6
nohup cutadapt -j 5 -m 5 --fasta -u 4 -u -6 M6.extendedFrags.collapse.fa.gz -o M6.cutadapt.extendedFrags.collapse.cutBarcodes.fa.gz &> M6.cutadapt.log &
##M7
nohup cutadapt -j 5 -m 5 --fasta -u 4 -u -6 M7.extendedFrags.collapse.fa.gz -o M7.cutadapt.extendedFrags.collapse.cutBarcodes.fa.gz &> M7.cutadapt.log &
##M8
nohup cutadapt -j 5 -m 5 --fasta -u 4 -u -6 M8.extendedFrags.collapse.fa.gz -o M8.cutadapt.extendedFrags.collapse.cutBarcodes.fa.gz &> M8.cutadapt.log &
##M9
nohup cutadapt -j 5 -m 5 --fasta -u 4 -u -6 M9.extendedFrags.collapse.fa.gz -o M9.cutadapt.extendedFrags.collapse.cutBarcodes.fa.gz &> M9.cutadapt.log &
##M10
nohup cutadapt -j 5 -m 5 --fasta -u 4 -u -6 M10.extendedFrags.collapse.fa.gz -o M10.cutadapt.extendedFrags.collapse.cutBarcodes.fa.gz &> M10.cutadapt.log &
##M11
nohup cutadapt -j 5 -m 5 --fasta -u 4 -u -6 M11.extendedFrags.collapse.fa.gz -o M11.cutadapt.extendedFrags.collapse.cutBarcodes.fa.gz &> M11.cutadapt.log &
##M12
nohup cutadapt -j 5 -m 5 --fasta -u 4 -u -6 M12.extendedFrags.collapse.fa.gz -o M12.cutadapt.extendedFrags.collapse.cutBarcodes.fa.gz &> M12.cutadapt.log &