diff --git a/finetuning/generalists/training/electron_microscopy/obtain_em_datasets.py b/finetuning/generalists/training/electron_microscopy/obtain_em_datasets.py index 2c76ed00..6d429e68 100644 --- a/finetuning/generalists/training/electron_microscopy/obtain_em_datasets.py +++ b/finetuning/generalists/training/electron_microscopy/obtain_em_datasets.py @@ -76,12 +76,11 @@ def _check_dataset_available_for_rois(path, patch_shape): datasets.get_platynereis_cell_dataset(path=os.path.join(path, "platynereis"), patch_shape=patch_shape, download=True) datasets.get_platynereis_nuclei_dataset(path=os.path.join(path, "platynereis"), patch_shape=patch_shape, download=True) datasets.get_platynereis_cilia_dataset(path=os.path.join(path, "platynereis"), patch_shape=patch_shape, download=True) - print("All the datasets are available") + print("All the datasets are available for RoI splitting") def get_concat_em_datasets(input_path, patch_shape): _check_dataset_available_for_rois(path=input_path, patch_shape=patch_shape) - breakpoint() sampler = MinInstanceSampler() diff --git a/finetuning/generalists/training/electron_microscopy/train_em_generalists.py b/finetuning/generalists/training/electron_microscopy/train_em_generalist.py similarity index 100% rename from finetuning/generalists/training/electron_microscopy/train_em_generalists.py rename to finetuning/generalists/training/electron_microscopy/train_em_generalist.py