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_pkgdown.yml
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url: https://dd-harp.github.io/ramp.xds
navbar:
left:
- text: Articles
menu:
- text: Getting Started
href: articles/GettingStarted.html
- text: Basic Setup
href: articles/BasicSetup.html
- text: Working with Models
href: articles/Working.html
- text: Trace Functions
href: articles/TraceFunctions.html
- text: Understanding ramp.xds
href: articles/Understanding_ramp.xds.html
- text: Modular Forms
href: articles/modular_forms.html
- text: 5-3-4 Spatial Example
href: articles/ex_534.html
- text: Spatial Metrics
href: articles/spat_metric.html
- text: Exposure
href: articles/Exposure.html
- text: Contributing
href: articles/Contributing.html
- text: Mosquito - Adult
menu:
- text: Macdonald's Model
href: articles/adult_RM.html
- text: Ross-Macdonald, discrete time
href: articles/RM-dts-Mosquito.html
- text: Generalized Ross-Macdonald model
href: articles/adult_GeRM.html
- text: Mosquito - Aquatic
menu:
- text: Aquatic - Trivial (forced) model
href: articles/aqua_trace.html
- text: Basic Competition
href: articles/aqua_basic.html
- text: Human / Host
menu:
- text: SIS model
href: articles/human_sis.html
- text: MoI hybrid model
href: articles/human_hmoi.html
- text: Functions
href: reference/index.html
right:
- icon: fa-github
href: https://github.com/dd-harp/ramp.xds/
home:
sidebar:
structure:
- links
- license
- community
- citation
- authors
- dev
reference:
- title: Model Building & Analysis
desc: |
Methods to support nimble model building and analysis
- subtitle: Build / Setup
desc: |
Methods to set up an **`xds`** object with basic features
contents:
- xds_setup
- xds_setup_mosy
- xds_setup_aquatic
- xds_setup_human
- xds_setup_cohort
- make_xds_template
- subtitle: Solve and Analyze
desc: |
Methods to solve or analyze equations
contents:
- xds_solve
- xde_stable_orbit
- xds_solve_cohort
- xde_steady
- dts_steady
- xde_steady_state_X
- xde_steady_state_MYZ
- xde_steady_state_L
- subtitle: Models -- Human / Host
desc: |
Models available in **`ramp.xds`** for human/host infection and immunity
contents:
- dXdt.trivial
- dXdt.SIS
- subtitle: Models -- Adult Mosquito
desc: |
Models available in **`ramp.xds`** for adult mosquito ecology and infection dynamics
contents:
- dMYZdt.trivial
- dMYZdt.SI
- dMYZdt.macdonald
- dMYZdt.GeRM
- dMYZdt.basicM
- subtitle: Models -- Aquatic Mosquito
desc: |
Models available in **`ramp.xds`** for the ecology of immature mosquitoes in aquatic habitats
contents:
- dLdt.trivial
- dLdt.basicL
- subtitle: Interface
desc: |
Functions that compute dynamical terms and exogenous variables
contents:
- Forcing
- Health
- VectorControl
- Resources
- BloodFeeding
- EggLaying
- BaselineBionomics
- Bionomics
- Transmission
- Exposure
- subtitle: Change Parameters & Initial Values
desc: |
Methods to set up basic models
contents:
- set_H
- set_eir
- set_eir.cohort
- update_inits
- last_to_inits
- parse_orbits
- parse_y
- get_inits
- get_H
- get_XH
- get_MYZ
- make_indices
- trigger_setup
- subtitle: Examine
desc: |
Methods to
contents:
- get_inits
- get_last
- parse_orbits
- parse_y
- title: Blood Feeding and Transmission
desc: |
Methods to compute terms describing blood feeding and transmission
contents:
- create_residence_matrix
- view_residence_matrix
- subtitle: Blood Feeding
desc: |
Methods to compute vertebrate host availibility and time at risk
contents:
- setup_BLOOD_FEEDING
- BloodFeeding
- BloodFeeding.static
- BloodFeeding.dynamic
- BloodFeeding.setup
- change_blood_weights
- compute_W
- compute_B
- make_WB
- compute_RBR
- make_RBR
- compute_TaR
- make_TaR
- subtitle: Transmision
desc: |
Specialized methods to compute the transmission terms
contents:
- setup_TRANSMISSION
- Transmission
- Transmission.static
- Transmission.dynamic
- Transmission.setup
- compute_beta
- make_beta
- compute_EIR
- make_EIR_full
- make_EIR
- compute_kappa
- make_kappa
- compute_local_frac
- make_local_frac
- subtitle: Time Spent
desc: |
Method to set up Time Spent Matrices
contents:
- change_TimeSpent
- make_TimeSpent
- make_TimeSpent.athome
- create_TimeSpent_athome
- make_TimeSpent.as_matrix
- make_TimeSpent.xy
- create_TimeSpent_xy
- title: Egg Laying & Emergence
desc: |
Generic methods for the aquatic (immature) mosquito component.
contents:
- create_habitat_matrix
- setup_EGG_LAYING
- Emergence
- EggLaying
- EggLaying.setup
- EggLaying.static
- EggLaying.dynamic
- change_habitat_weights
- compute_Q
- compute_Qtot
- make_Q
- compute_calU
- make_calU
- compute_eggs_laid
- make_eggs_laid
- view_habitat_matrix
- title: Exposure
desc: |
Methods for environmental heterogeneity
contents:
- Exposure
- Exposure.xde
- Exposure.dts
- Exposure.multiday
- setup_exposure_multiday
- F_foi
- foi2eir
- F_ar
- ar2eir
- subtitle: Poisson Exposure
desc: |
Specialized methods the Poisson exposure model
contents:
- F_foi.pois
- F_ar.pois
- foi2eir.pois
- ar2eir.pois
- setup_exposure_pois
- setup_exposure_pois.xde
- setup_exposure_pois.dts
- subtitle: Negative Binomial Exposure
desc: |
Specialized methods the Negative Binomial exposure model
contents:
- F_foi.nb
- F_ar.nb
- foi2eir.nb
- ar2eir.nb
- setup_exposure_nb
- setup_exposure_nb.xde
- setup_exposure_nb.dts
- title: Adult Mosquito Dynamics
desc: |
Generic methods for the adult mosquito dynamics component.
contents:
- dMYZdt
- MBaseline
- MBionomics
- xde_steady_state_MYZ
- xde_steady_state_M
- setup_MYZpar
- Update_MYZt
- MYZ_rates2probs
- dts_steady_state_MYZ
- F_fqZ
- F_fqM
- F_eggs
- list_MYZvars
- get_MYZpars
- set_MYZpars
- put_MYZvars
- setup_MYZinits
- get_MYZinits
- set_MYZinits
- update_MYZinits
- setup_MYZix
- parse_MYZorbits
- subtitle: Visualization for Adult Mosquito
desc: |
Basic Plotting
contents:
- xds_plot_M
- xds_lines_M
- xds_plot_Y
- xds_lines_Y
- xds_plot_Z
- xds_lines_Z
- xds_plot_Y_fracs
- xds_lines_Y_fracs
- xds_plot_Z_fracs
- xds_lines_Z_fracs
- subtitle: Mosquito Demography
desc: |
Specialized methods for NULL dynamics: a funtion generates values of Z to force human infection dynamics
contents:
- compute_Omega_xde
- compute_Omega_dts
- compute_Omega
- compute_Omega.xde
- compute_Omega.dts
- compute_Upsilon
- compute_Upsilon.xde
- make_Omega
- make_Omega.xde
- make_Omega.dts
- get_Omega
- get_Upsilon
- subtitle: EIP
desc: |
Specialized methods for NULL dynamics: a funtion generates values of Z to force human infection dynamics
contents:
- F_eip
- d_F_eip_dt
- setup_EIP
- F_eip.static
- d_F_eip_dt.static
- F_eip.fixedlag_dts
- setup_EIP.fixedlag_dts
- setup_eip_fixedlag_dts
- subtitle: trivial
desc: |
Specialized methods for NULL dynamics: a funtion generates values for F_eggs or F_fqZ or F_fqM
contents:
- F_fqZ.trivial
- F_fqM.trivial
- F_eggs.trivial
- dMYZdt.trivial
- MBaseline.trivial
- MBionomics.trivial
- Update_MYZt.trivial
- setup_MYZpar.trivial
- get_MYZpars.trivial
- set_MYZpars.trivial
- set_MYZinits.trivial
- make_MYZpar_trivial
- xde_steady_state_MYZ.trivial
- setup_MYZinits.trivial
- setup_MYZix.trivial
- parse_MYZorbits.trivial
- get_MYZinits.trivial
- update_MYZinits.trivial
- subtitle: basicM
desc: |
Specialized methods for basicM, a model of adult mosquito dynamics with no parasite infection dynamics.
contents:
- dMYZdt.basicM
- MBaseline.basicM
- MBionomics.basicM
- xde_steady_state_M.basicM
- Update_MYZt.basicM
- setup_MYZpar.basicM
- F_fqZ.basicM
- F_fqM.basicM
- F_eggs.basicM
- setup_MYZinits.basicM
- make_MYZinits_basicM
- setup_MYZix.basicM
- list_MYZvars.basicM
- get_MYZpars.basicM
- set_MYZpars.basicM
- set_MYZinits.basicM
- parse_MYZorbits.basicM
- get_MYZinits.basicM
- update_MYZinits.basicM
- subtitle: The "SI" model for infection
desc: |
Specialized methods for simple infection dynamics for an adult mosquito population
contents:
- dMYZdt.SI
- MBaseline.SI
- MBionomics.SI
- xde_steady_state_MYZ.SI
- Update_MYZt.SI
- setup_MYZpar.SI
- make_MYZpar_SI
- F_fqZ.SI
- F_fqM.SI
- F_eggs.SI
- list_MYZvars.SI
- get_MYZpars.SI
- set_MYZpars.SI
- set_MYZinits.SI
- put_MYZvars.SI
- setup_MYZinits.SI
- make_MYZinits_SI
- setup_MYZix.SI
- parse_MYZorbits.SI
- get_MYZinits.SI
- update_MYZinits.SI
- get_f.SI
- get_q.SI
- get_g.SI
- get_sigma.SI
- subtitle: macdonald
desc: |
Specialized methods for a Macdonald-style model of adult mosquito dynamics, modified slightly from a model published by Joan Aron & Robert May (1982).
contents:
- dMYZdt.macdonald
- MBaseline.macdonald
- MBionomics.macdonald
- xde_steady_state_MYZ.macdonald
- setup_MYZpar.macdonald
- make_MYZpar_macdonald
- list_MYZvars.macdonald
- get_MYZpars.macdonald
- set_MYZpars.macdonald
- set_MYZinits.macdonald
- F_fqZ.macdonald
- F_fqM.macdonald
- F_eggs.macdonald
- setup_MYZinits.macdonald
- make_MYZinits_macdonald
- get_MYZinits.macdonald
- update_MYZinits.macdonald
- setup_MYZix.macdonald
- parse_MYZorbits.macdonald
- get_f.macdonald
- get_q.macdonald
- get_g.macdonald
- get_sigma.macdonald
- subtitle: GeRM
desc: |
Specialized methods for a Ross-Macdonald-style model of adult mosquito dynamics, modified slightly from a model published by Joan Aron & Robert May (1982).
contents:
- dMYZdt.GeRM
- MBaseline.GeRM
- MBionomics.GeRM
- Update_MYZt.GeRM
- xde_steady_state_MYZ.GeRM
- setup_MYZpar.GeRM
- make_MYZpar_GeRM
- list_MYZvars.GeRM
- get_MYZpars.GeRM
- set_MYZpars.GeRM
- set_MYZinits.GeRM
- F_fqZ.GeRM
- F_fqM.GeRM
- F_eggs.GeRM
- setup_MYZinits.GeRM
- make_MYZinits_GeRM
- get_MYZinits.GeRM
- update_MYZinits.GeRM
- setup_MYZix.GeRM
- parse_MYZorbits.GeRM
- get_f.GeRM
- get_q.GeRM
- get_g.GeRM
- get_sigma.GeRM
- subtitle: RM-Mosquito in discrete-time
desc: |
Specialized methods for a Ross-Macdonald-style model of adult mosquito dynamics, in discrete time.
contents:
- F_fqZ.RM_dts
- F_fqM.RM_dts
- F_eggs.RM_dts
- Update_MYZt.RM_dts
- setup_MYZinits.RM_dts
- list_MYZvars.RM_dts
- put_MYZvars.RM_dts
- make_MYZinits_RM_dts
- setup_MYZix.RM_dts
- parse_MYZorbits.RM_dts
- get_MYZinits.RM_dts
- update_MYZinits.RM_dts
- title: Aquatic Mosquito Dynamics
desc: |
Generic methods for the aquatic (immature) mosquito component.
contents:
- dLdt
- Update_Lt
- F_emerge
- LBionomics
- LBaseline
- setup_Lpar
- get_Lpars
- set_Lpars
- setup_Linits
- list_Lvars
- update_Linits
- set_Linits
- get_Linits
- setup_Lix
- parse_Lorbits
- xde_steady_state_L
- dts_steady_state_L
- subtitle: trivial
desc: |
Specialized methods for the exogeneously forced trivial model of aquatic mosquito dynamics.
contents:
- dLdt.trivial
- Update_Lt.trivial
- F_emerge.trivial
- LBionomics.trivial
- LBaseline.trivial
- setup_Lpar.trivial
- make_Lpar_trivial
- get_Lpars.trivial
- set_Lpars.trivial
- setup_Linits.trivial
- list_Lvars.trivial
- set_Linits.trivial
- update_Linits.trivial
- setup_Lix.trivial
- parse_Lorbits.trivial
- xde_steady_state_L.trivial
- subtitle: basicL
desc: |
Specialized methods for a basicL competition model of aquatic mosquito dynamics.
contents:
- dLdt.basicL
- Update_Lt.basicL
- setup_Lpar.basicL
- make_Lpar_basicL
- LBionomics.basicL
- LBaseline.basicL
- F_emerge.basicL
- setup_Linits.basicL
- make_Linits_basicL
- list_Lvars.basicL
- get_Lpars.basicL
- set_Lpars.basicL
- set_Linits.basicL
- setup_Lix.basicL
- parse_Lorbits.basicL
- update_Linits.basicL
- xde_steady_state_L.basicL
- title: Mosquito Bionomics
desc: |
Methods to compute or update mosquito bionomic parameters
contents:
- Bionomics
- subtitle: Functional Responses
desc: |
Compute bionomic parameters as functional responses to resource availability
contents:
- F_f
- F_q
- F_g
- F_p
- F_sigma
- F_mu
- F_nu
- F_calK
- F_f.static
- F_q.static
- F_g.static
- F_sigma.static
- F_mu.static
- F_nu.static
- F_calK.static
- F_sigma.BQS
- F_nu.type2
- F_f.type2
- F_q.dynamic
- subtitle: Mosquito Dispersal
desc: |
Specialized methods to set up mosquito dispersal matrices
contents:
- change_calK
- make_calK
- make_calK.herethere
- create_calK_herethere
- make_calK.as_matrix
- make_calK.xy
- create_calK_xy
- title: Human Infection Dynamics
desc: |
Generic methods for the dynamical component that handles human infection dynamics, immunity, disease and transmission
contents:
- dXdt
- Update_Xt
- setup_Xinits
- setup_Xix
- list_Xvars
- get_Xpars
- set_Xpars
- put_Xvars
- setup_Xpar
- F_X
- F_H
- F_b
- parse_Xorbits
- get_Xinits
- set_Xinits
- update_Xinits
- HTC
- F_pr
- F_pr_by_lm
- F_pr_by_rdt
- F_pr_by_pcr
- xds_plot_X
- xde_steady_state_X
- xde_steady_state_XH
- dts_steady_state_X
- subtitle: trivial
desc: |
Specialized methods for a human trivial model to pass kappa as a parameter
contents:
- F_X.trivial
- F_H.trivial
- F_pr.trivial
- xde_steady_state_X.trivial
- F_pr_by_lm.trivial
- F_pr_by_rdt.trivial
- F_pr_by_pcr.trivial
- F_b.trivial
- dXdt.trivial
- Update_Xt.trivial
- setup_Xpar.trivial
- make_Xpar_trivial
- setup_Xinits.trivial
- setup_Xix.trivial
- parse_Xorbits.trivial
- get_Xinits.trivial
- set_Xinits.trivial
- get_Xpars.trivial
- set_Xpars.trivial
- update_Xinits.trivial
- subtitle: hMoI
desc: |
Specialized methods for a hybrid model of MoI (Multiplicity of Infection) for human infection dynamics.
contents:
- dXdt.hMoI
- setup_Xpar.hMoI
- make_Xpar_hMoI
- xde_steady_state_X.hMoI
- setup_Xinits.hMoI
- make_Xinits_hMoI
- setup_Xix.hMoI
- F_X.hMoI
- F_H.hMoI
- F_b.hMoI
- F_pr.hMoI
- F_pr_by_lm.hMoI
- F_pr_by_rdt.hMoI
- F_pr_by_pcr.hMoI
- parse_Xorbits.hMoI
- get_Xinits.hMoI
- set_Xinits.hMoI
- get_Xpars.hMoI
- set_Xpars.hMoI
- update_Xinits.hMoI
- HTC.hMoI
- subtitle: SIS
desc: |
Specialized methods for the SIS (Susceptible-Infected-Susceptible) model of human dynamics.
contents:
- dXdt.SIS
- Update_Xt.SIS
- setup_Xpar.SIS
- make_Xpar_SIS
- setup_Xinits.SIS
- make_Xinits_SIS
- setup_Xix.SIS
- list_Xvars.SIS
- get_Xpars.SIS
- set_Xpars.SIS
- put_Xvars.SIS
- F_X.SIS
- F_H.SIS
- F_b.SIS
- parse_Xorbits.SIS
- get_Xinits.SIS
- set_Xinits.SIS
- update_Xinits.SIS
- HTC.SIS
- F_pr.SIS
- F_pr_by_lm.SIS
- F_pr_by_rdt.SIS
- F_pr_by_pcr.SIS
- xds_plot_X.SIS
- add_lines_X_SIS
- xde_steady_state_X.SIS
- dts_steady_state_X.SIS
- title: Human Population Dynamics
desc: |
Methods for the human demography and aging
contents:
- dHdt
- setup_Hpar_static
- Births
- make_parameters_demography_null
- Births.zero
- dHdt.zero
- Births.static
- setup_births_static
- dHdt.matrix
- setup_Hmatrix
- subtitle: Care Seeking
desc: |
Methods to implement care seeking
contents:
- CareSeeking
- CareSeeking.no_behavior
- setup_care_seeking_no_behavior
- title: Imported Malaria
desc: |
Methods to implement time spent traveling
contents:
- traveling
- traveling.static
- traveling.setup
- traveling.dynamic
- setup_no_travel
- setup_static_travel
- setup_dynamic_travel
- Visiting
- subtitle: Travel Malaria
desc: |
Model the EIR while traveling
contents:
- travel_eir
- setup_travel_eir
- subtitle: Visiting
desc: |
Methods for the availability and infectiousness of a visitor population
contents:
- Visiting.static
- setup_visitors_static
- Visiting.basic
- setup_visitors_basic
- title: Exogeneous Forcing
desc: |
Methods to implement exogeneous forcing.
contents:
- Exogenous
- Forcing
- Weather
- Rainfall
- Shock
- Health
- VectorControl
- Clinic
- Development
- MassHealth
- subtitle: Forcing
desc: |
Specialized methods the null model (no exogenous forcing)
contents:
- Forcing
- Forcing.none
- setup_no_forcing
- Forcing.dynamic
- Forcing.setup
- dynamic_forcing
- dynamic_forcing.none
- dynamic_forcing.setup
- dynamic_forcing.dynamic
- subtitle: Models
desc: |
Specialized methods the null model (no exogenous forcing)
contents:
- Shock.none
- setup_no_shock
- Development.none
- Development.func
- setup_no_development
- Health.none
- setup_no_health
- title: Weather
desc: |
Specialized methods for weather
contents:
- Weather
- Weather.none
- Weather.dynamic
- setup_no_weather
- dynamic_weather
- dynamic_weather.none
- dynamic_weather.setup
- dynamic_weather.dynamic
- subtitle: Temperature
desc: |
Specialized methods for temperature
contents:
- Temperature
- Temperature.none
- setup_no_temperature
- setup_temperature
- Temperature.func
- setup_temperature.func
- setup_temperature_func
- subtitle: Rainfall
desc: |
Specialized methods for rainfall
contents:
- Rainfall
- Rainfall.none
- setup_no_rainfall
- setup_rainfall
- Rainfall.func
- setup_rainfall.func
- setup_rainfall_func
- subtitle: Humidity
desc: |
Specialized methods for humidity
contents:
- Humidity
- Humidity.none
- setup_no_humidity
- setup_humidity
- Humidity.func
- setup_humidity.func
- setup_humidity_func
- subtitle: Hydrology
desc: |
Specialized methods for hydrology
contents:
- Hydrology
- Hydrology.none
- setup_no_hydrology
- Hydrology.func
- setup_hydrology
- setup_hydrology.func
- setup_hydrology_func
- subtitle: Shock
desc: |
Specialized methods for hydrology
contents:
- Shock
- Shock.none
- setup_no_shock
- setup_shock
- Shock.func
- setup_shock.func
- setup_shock_func
- subtitle: Development
desc: |
Specialized methods for hydrology
contents:
- Development
- Development.none
- setup_no_development
- setup_development
- Development.func
- setup_development.func
- setup_development_func
- title: Resource Dynamics
desc: |
Methods to implement resource availability
contents:
- Resources
- Resources.static
- Resources.setup
- Resources.forced
- setup_resources_static
- setup_resources_forced
- subtitle: Other Blood Hosts
desc: |
Methods to simulate availability of other blood hosts
contents:
- OtherBloodHosts
- OtherBloodHosts.static
- setup_other_blood_hosts_static
- subtitle: Habitat Dynamics and Availability
desc: |
Specialized methods for weather
contents:
- HabitatDynamics
- HabitatDynamics.static
- setup_habitat_dynamics_static
- subtitle: Sugar
desc: |
Methods to simulate availability of sugar
contents:
- SugarDynamics
- SugarDynamics.static
- setup_sugar_static
- AvailableSugar
- AvailableSugar.static
- AvailableSugar.forced
- title: Vector Control
desc: |
Methods to implement vector control.
contents:
- VectorControl
- VectorControl.none
- VectorControl.dynamic
- VectorControl.setup
- VectorControlEffectSizes
- VectorControlEffectSizes.none
- VectorControlEffectSizes.dynamic
- setup_no_vector_control
- dynamic_vector_control
- dynamic_vector_control.none
- dynamic_vector_control.setup
- dynamic_vector_control.dynamic
- subtitle: Bed Nets
desc: |
Specialized methods to implement Bed Nets
contents:
- BedNet
- BedNet.none
- BedNetEffectSizes
- BedNetEffectSizes.none
- setup_no_bednets
- subtitle: Indoor Residual Spraying
desc: |
Methods to implement IRS
contents:
- IRS
- IRS.none
- IRSEffectSizes
- IRSEffectSizes.none
- setup_no_irs
- subtitle: Larval Source Management (LSM)
desc: |
Methods to implement LSM
contents:
- LSM
- LSM.none
- setup_no_lsm
- subtitle: Area Spraying
desc: |
Methods to implement area spraying
contents:
- AreaSpray
- AreaSpray.none
- setup_no_area_spray
- subtitle: Sugar Baits
desc: |
Methods to implement sugar baits
contents:
- SugarBaits
- SugarBaits.none
- setup_no_sugar_baits
- subtitle: Ovitraps
desc: |
Specialized methods for ovitraps
contents:
- OviTraps
- OviTraps.none
- setup_no_ovitraps
- title: Health
desc: |
Methods to implement health-based Interventions
contents:
- Health
- Health.none
- setup_no_health
- Health.dynamic
- Health.setup
- dynamic_health
- dynamic_health.none
- dynamic_health.setup
- dynamic_health.dynamic
- subtitle: Clinic
desc: |
Methods to implement clinic-based interventions
contents:
- Clinic
- Clinic.none
- setup_no_clinic
- subtitle: School
desc: |
Methods to implement school-based interventions
contents:
- School
- School.none
- setup_no_school
- subtitle: MassHealth
desc: |
Methods to implement clinic-based interventions
contents:
- MassHealth
- MassHealth.none
- setup_no_mass_health
- subtitle: ActiveCaseDetection
desc: |
Methods to implement clinic-based interventions
contents:
- ActiveCaseDetection
- ActiveCaseDetection.none
- setup_no_active_case_detection
- title: Solving
desc: |
Methods to compute the derivatives and solve the equat
- subtitle: Derivatives
contents:
- xde_derivatives
- xde_derivatives.full
- xde_derivatives.aquatic
- xde_derivatives.mosy
- xde_derivatives.human
- subtitle: Cohort Dynamics
contents:
- xds_solve_cohort
- xde_cohort_derivatives
- xde_cohort_desolve
- xde_cohort_desolve.dde
- xde_cohort_desolve.ode
- subtitle: Update
contents:
- dts_update
- dts_update.full
- dts_update.aquatic
- dts_update.mosy
- dts_update.human
- dts_update.cohort