diff --git a/README.md b/README.md index b6cf5cf..9bf4eb2 100644 --- a/README.md +++ b/README.md @@ -289,7 +289,7 @@ page](http://deweylab.github.io/RSEM/convert-sam-for-rsem.html). Note that RSEM does ** not ** support gapped alignments. So make sure that your aligner does not produce alignments with -intersions/deletions. In addition, you should make sure that you use +insertions/deletions. In addition, you should make sure that you use `reference_name.idx.fa`, which is generated by RSEM, to build your aligner's indices.