From 83c335f8fb6f89f38920bcdef6b08cbbb0fe3d37 Mon Sep 17 00:00:00 2001
From: fletchercr <catherine.fletcher4@nhs.net>
Date: Thu, 24 Oct 2024 10:07:46 +0100
Subject: [PATCH 1/2] Update Clinvar 20241015

---
 ...ep_config_v1.2.11.json => tso500_vep_config_v1.2.12.json | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)
 rename tso500_vep_config_v1.2.11.json => tso500_vep_config_v1.2.12.json (96%)

diff --git a/tso500_vep_config_v1.2.11.json b/tso500_vep_config_v1.2.12.json
similarity index 96%
rename from tso500_vep_config_v1.2.11.json
rename to tso500_vep_config_v1.2.12.json
index c577476..28bb953 100644
--- a/tso500_vep_config_v1.2.11.json
+++ b/tso500_vep_config_v1.2.12.json
@@ -2,7 +2,7 @@
     "config_information":{
         "genome_build": "GRCh37",
         "assay":"TSO500",
-        "config_version": "1.2.11"
+        "config_version": "1.2.12"
     },
         "vep_resources":{
         "vep_docker":"file-G8V2Vz0433Gp5bYPF2f6vg9X",
@@ -23,8 +23,8 @@
         "required_fields":"ClinVar,ClinVar_CLNSIG,ClinVar_CLNSIGCONF,ClinVar_CLNDN",
         "resource_files": [
           {
-          "file_id":"file-GqZ19784jq8Z0pvgxf32X5F9",
-          "index_id":"file-GqZ194j468yp3YFX59zKGY7K"
+          "file_id":"file-GvF2VX8433pFPFJ82B699Q2f",
+          "index_id":"file-GvF2X304gx81FgJpgF7B7Z3j"
           }
         ]
       },

From 49fcbcd848e0170b13d5c86527baa8542da58023 Mon Sep 17 00:00:00 2001
From: fletchercr <catherine.fletcher4@nhs.net>
Date: Thu, 24 Oct 2024 11:57:05 +0100
Subject: [PATCH 2/2] Updated readme

---
 README.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/README.md b/README.md
index 3da332c..c2a7d4e 100644
--- a/README.md
+++ b/README.md
@@ -21,7 +21,7 @@ This json file provides information about annotations,plugins, required fields a
   * Homo_sapiens.GRCh37.dna.toplevel.fa.gz.gzi
   * hs37d5.fasta-index.tar.gz
 * Custom Annotation sources:
-  * clinvar_20240909_GRCh37.vcf.gz
+  * clinvar_20241015_GRCh37.vcf.gz
   * gnomad.genomes.r2.0.1.sites.noVEP_normalised_decomposed_PASS.vcf.gz
   * gnomad.exomes.r2.0.2.sites.noVEP_normalised_decomposed_PASS.vcf.gz
 * Plugin annotations: