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Tier 2 definitions #1286

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arschat opened this issue Jul 30, 2024 · 1 comment
Open

Tier 2 definitions #1286

arschat opened this issue Jul 30, 2024 · 1 comment
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Epic HCA operations This issue is an operational task

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@arschat
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arschat commented Jul 30, 2024

Epic of all bionetworks' Tier 2 definitions

Tier 2: folder, cross bionetwork summary spreadsheet
Initial communication tracker: document
Tier 1: folder, definitions, mapping

Templates

Bionetwork #ticket State Folder Definitions/ Mapping Template Correspondence
Lung #1235 Finalised lung def / map template
Oral and Craniofacial #1280 Finalised oral def / map template
Genetic Diversity #1245 Finalising genetic_diversity doc/ sheet generic doc
Gut #1287 In progress gut recs/ kyle's doc
Musculoskeletal #1285 In progress musculoskeletal recs template doc
Immune 1st call soon immune recs doc
Liver 1st call soon liver recs
Eye eye recs doc
Pancreas pancreas recs
Heart heart recs
Kidney kidney recs
Adipose adipose recs
Skin
Organoid
Reproduction
Breast
Development
Nervous System
@arschat arschat added operations This issue is an operational task Epic labels Jul 30, 2024
@arschat
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arschat commented Aug 16, 2024

To update Tier 2 bionetworks summary:

  • conf_pull_data: drag and drop the importrange function until it imports all the fields from corresponding spreadsheet, and make sure it doesn't overlap with other bionetworks' fields. edit existing importrange range to include new field(s)
  • conf_map_dcp: if there is a new map, paste the T2 field in column A, and the mapped dcp field in column B
  • conf_similar_fields:
    • if field already exists with other name, paste in columns C, D, E, F
    • if field is a novel field, add a new row in appropriate group (column G) and fill column A and G accordingly

@idazucchi idazucchi added the HCA label Sep 23, 2024
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