1.0.0-dev-stable

• Same as v1.0.0, but with all the functions that do not pass CRAN checks. These functions are: SCpubr::save_Plot() SCpubr::do_LigandReceptorPlot() and SCpubr::do_SankeyPlot().

Install using:

devtools::install_github("enblacar/SCpubr", ref = "v1.0.0-dev-stable")

1.0.0

• Modified internal checks so that the functions that do not use Seurat do not require this to be installed. This is just for the very side case in which somebody downloads the package just for the SCpubr::do_ColorPalette() function.
• Removed the option to use individual.titles, 'individual.subtitlesandindividual.captionsinSCpubr::do_NebulosaPlot()` as the benefit of such parameters did not surpass the problems the code was causing. The feature might come back in the future, once fully optimized.
• Removed SCpubr::save_Plot() function to align with CRAN policies that the package should not write to the file system. The code is still available in the v0.0.0.0.9000 release in Github.
• Removed SCpubr::do_LigandReceptorPlot(), SCpubr::do_SankeyPlot() and SCpubr::do_PseudotimePlot() to align with CRAN policies and make it possible to publish the package. These functions can still be accessed in the v0.0.0.0.9000 release in Github.
• Removed SCpubr::do_PseudotimePlot() for the reason above and because the dependency Matrix.utils was removed from CRAN on 09-10-2022.

You can install it using:

devtools::install_github("enblacar/SCpubr", ref = "v1.0.0")

0.0.0.9000

This is the state of SCpubr prior to submission to CRAN.

To install this release, please use:

devtools::install_github("enblacar/SCpubr", ref = "v0.0.0.9000")