- Update to HiGlass
v1.7.2
- Add support for cooler v2
- Add support for dm6 and ce11 gene annotations
- Use file specific chrom sizes when internal chrom sizes are not available
- Allow specifiying custom gene annotations via the
_gene_annotations
column in the CSV config file._gene_annotations
can either be the name of a preexisting coords (e.g.,hg19
,hg38
,mm9
,mm10
,dm6
,danRer10
, orce11
) or you can specify the tileset UUID of a locally hosted gene annotation tileset. - Fix an bug causing the spinner to appear all the time
Breaking Change:
- HiPiler now expects you to specify the exact chromosome names. Previously it would ensure that
chr
is prepend for convenience when working with hg19 and mm9
- Update to HiGlass
v1.2.3
- Fix minor code style issues
- Add support for CSV import
- Add dynamic reloading of the snippets.
- Updated HiGlass to
v1.0.1
- Updated lots of third-party libraries
- Fixed several smaller bug fixes
- Add color maps and color scaling for snippets
- Show pile source and genomic location in pile detail panel
- Updated HiGlass to
v0.10.11
- Updated lots of third-party libraries
- Updated news
- Load
react
,react-dom
,react-bootstrap
, andpixi.js
from CDN
- Add build task for the entire app for easier integration with HiGlass docker
- Updated
marked
tov0.3.9
- Finally fixed anchor links on hipiler.higlass.io
- Fix typos
- Add slides from speakerdeck to about
- Fix typos
- Update news
- Fix view config loading
- Disable buggy server pinging
- Fix anchor links on hipiler.higlass.io
- Adjust anchor links on hipiler.higlass.io
- Limit height and width of entries in the pile details panel
- Limit number of marks on the x axis of chartlets
- Limit height of the previews in the pile details panel
- Fix a rare issue with rerendering chartlets
- Updated hiGlass to
v0.8.34
- Updated some third party librabries
- Improve frame rendering performance dramatically
- Improve scale and location updates of snippets to be blazing fast
- Add pile details panel with annotations
- Add support for loading configs via the URL
?config=<URL_TO_CONFIG>
- Allow config to be more flexible
- Disable state compression because it's too slow
- Nicefy disperse animation when doing undo
- Ensure compatability in latest version of Firefox
- Add link to HiGlass.io
- Fix minor issue with the arrange field
- Fix auot-piling by more categorical values (dataset, zoom level, chromosome, or a user-specified category)
- Add button to explicitely close error messages
- Fix scrolling in Firefox
- 5-10x faster snippet rendering
- Implement removing matrices from piles
- Highlight hovered preview
- Update pile menu instantly
- Add log transform for snippets
- Add config options for t-SNE
- Fix matrix flipping
- Fix scroll issue after changing the cell size
- Fix dialog during exploration
- Fix t-SNE based arrangements by measures / attributes
- Fix bug when switching between grey scale and colored colormaps
- Fix bug when toggling between showing snippet locations
- Fix dialog
- Fix orientation
- Fix state reset (truly working this time!)
- Add support for loading unbalanced snippets
- Add introduction video
- Add 2 more examples
- Add changelog
- Enhance "Show in matrix"
- Fix a column resizing caused by a bug in Aurelia
- Fix state reset
- Fix bug when pulling non-standard snippets
- Update HiGlass
- Update third-party libraries
- Add support for HiDPI displays
- Fix interaction issues
- Scope CSS rules
- Fix import bug
- Always load latest example from GIST
- Add documentation
- Update icons
- Minor design updates
- Enable shortcuts for the dialog
- Code cleanup
- Design landing page
- Lower memory footprint
- Support Numpy's NaN mean
- Fix event listener bugs
- Update third-party libraries
- Update license
- Integrate Travis-CI
- Initial pre-release for IEEE VIS 2017