From 2caf95ba8011a09d103104d931be3605ece8114d Mon Sep 17 00:00:00 2001 From: Thomas Weber Date: Mon, 24 Jun 2024 21:23:13 +0000 Subject: [PATCH] Missing storage plugin dependencie --- .github/workflows/main_test.yaml | 22 +++++++++++----------- 1 file changed, 11 insertions(+), 11 deletions(-) diff --git a/.github/workflows/main_test.yaml b/.github/workflows/main_test.yaml index ea2ea688..22a78a64 100644 --- a/.github/workflows/main_test.yaml +++ b/.github/workflows/main_test.yaml @@ -56,7 +56,7 @@ jobs: - name: Setup snakemake run: | - mamba install -c conda-forge -c bioconda snakemake + mamba install -c conda-forge -c bioconda snakemake snakemake-storage-plugin-http - name: Run Snakemake Lint run: | @@ -101,7 +101,7 @@ jobs: run: conda install -c conda-forge mamba - name: Setup Snakemake - run: mamba install -c conda-forge -c bioconda snakemake + run: mamba install -c conda-forge -c bioconda snakemake snakemake-storage-plugin-http - name: List options of workflow run: | @@ -151,7 +151,7 @@ jobs: # run: conda install -c conda-forge mamba # - name: Setup Snakemake - # run: mamba install -c conda-forge -c bioconda snakemake + # run: mamba install -c conda-forge -c bioconda snakemake snakemake-storage-plugin-http # - name: List options of workflow # run: | @@ -191,7 +191,7 @@ jobs: # run: conda install -c conda-forge mamba # - name: Setup Snakemake - # run: mamba install -c conda-forge -c bioconda snakemake + # run: mamba install -c conda-forge -c bioconda snakemake snakemake-storage-plugin-http # - name: List options of workflow # run: | @@ -231,7 +231,7 @@ jobs: # run: conda install -c conda-forge mamba # - name: Setup Snakemake - # run: mamba install -c conda-forge -c bioconda snakemake + # run: mamba install -c conda-forge -c bioconda snakemake snakemake-storage-plugin-http # - name: List options of workflow # run: | @@ -271,7 +271,7 @@ jobs: # run: conda install -c conda-forge mamba # - name: Setup Snakemake - # run: mamba install -c conda-forge -c bioconda snakemake + # run: mamba install -c conda-forge -c bioconda snakemake snakemake-storage-plugin-http # - name: List options of workflow # run: | @@ -311,7 +311,7 @@ jobs: # run: conda install -c conda-forge mamba # - name: Setup Snakemake - # run: mamba install -c conda-forge -c bioconda snakemake + # run: mamba install -c conda-forge -c bioconda snakemake snakemake-storage-plugin-http # - name: List options of workflow # run: | @@ -352,7 +352,7 @@ jobs: # run: conda install -c conda-forge mamba # - name: Setup Snakemake - # run: mamba install -c conda-forge -c bioconda snakemake + # run: mamba install -c conda-forge -c bioconda snakemake snakemake-storage-plugin-http # - name: List options of workflow # run: | @@ -393,7 +393,7 @@ jobs: # run: conda install -c conda-forge mamba # - name: Setup Snakemake - # run: mamba install -c conda-forge -c bioconda snakemake + # run: mamba install -c conda-forge -c bioconda snakemake snakemake-storage-plugin-http # - name: List options of workflow # run: | @@ -434,7 +434,7 @@ jobs: # run: conda install -c conda-forge mamba # - name: Setup Snakemake - # run: mamba install -c conda-forge -c bioconda snakemake + # run: mamba install -c conda-forge -c bioconda snakemake snakemake-storage-plugin-http # - name: List options of workflow # run: | @@ -475,7 +475,7 @@ jobs: # run: conda install -c conda-forge mamba # - name: Setup Snakemake - # run: mamba install -c conda-forge -c bioconda snakemake + # run: mamba install -c conda-forge -c bioconda snakemake snakemake-storage-plugin-http # - name: List options of workflow # run: |