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When running planemo workflow_edit I am currently getting this error:
Traceback (most recent call last):
File "/usr/local/bin/planemo", line 8, in <module>
sys.exit(planemo())
File "/usr/local/lib/python3.8/dist-packages/click/core.py", line 1130, in __call__
return self.main(*args, **kwargs)
File "/usr/local/lib/python3.8/dist-packages/click/core.py", line 1055, in main
rv = self.invoke(ctx)
File "/usr/local/lib/python3.8/dist-packages/click/core.py", line 1657, in invoke
return _process_result(sub_ctx.command.invoke(sub_ctx))
File "/usr/local/lib/python3.8/dist-packages/click/core.py", line 1404, in invoke
return ctx.invoke(self.callback, **ctx.params)
File "/usr/local/lib/python3.8/dist-packages/click/core.py", line 760, in invoke
return __callback(*args, **kwargs)
File "/usr/local/lib/python3.8/dist-packages/click/decorators.py", line 84, in new_func
return ctx.invoke(f, obj, *args, **kwargs)
File "/usr/local/lib/python3.8/dist-packages/click/core.py", line 760, in invoke
return __callback(*args, **kwargs)
File "/usr/local/lib/python3.8/dist-packages/planemo/cli.py", line 96, in handle_blended_options
return f(*args, **kwds)
File "/usr/local/lib/python3.8/dist-packages/planemo/commands/cmd_workflow_edit.py", line 21, in cli
runnable = for_runnable_identifier(ctx, workflow_identifier, kwds.get("profile"))
File "/usr/local/lib/python3.8/dist-packages/planemo/runnable_resolve.py", line 15, in for_runnable_identifier
current_profile = kwds.get("profile")
AttributeError: 'NoneType' object has no attribute 'get'
I created the pull request #1300 to get me past this, however all I then get is a Galaxy instance just as I would using planemo serve. This Galaxy instance also does not contain my workflow, nor does it have any of the workflow's tools installed.
Planemo version 0.74.11 and 0.75.2
Galaxy versions 22.01 and 22.05
I seem to remember, that in the past the command directly opened only a workflow editor, with the workflow. Back then I wasn't able to use it directly, because I had not set up planemo to know my toolshed and therefore it couldn't get any tools from there.
The text was updated successfully, but these errors were encountered:
When running planemo workflow_edit I am currently getting this error:
I created the pull request #1300 to get me past this, however all I then get is a Galaxy instance just as I would using
planemo serve
. This Galaxy instance also does not contain my workflow, nor does it have any of the workflow's tools installed.Planemo version 0.74.11 and 0.75.2
Galaxy versions 22.01 and 22.05
I seem to remember, that in the past the command directly opened only a workflow editor, with the workflow. Back then I wasn't able to use it directly, because I had not set up planemo to know my toolshed and therefore it couldn't get any tools from there.
The text was updated successfully, but these errors were encountered: