From 7891dafc0b63c7640140932d3ceac66bb985da3d Mon Sep 17 00:00:00 2001 From: jonca79 Date: Fri, 22 Nov 2024 13:08:35 +0100 Subject: [PATCH] feat(msisensor_pro): msi site filtering bedfile --- design/SelectedMSIloci2019Sorted.bed | 507 +++++++++++++++++++++++++++ 1 file changed, 507 insertions(+) create mode 100644 design/SelectedMSIloci2019Sorted.bed diff --git a/design/SelectedMSIloci2019Sorted.bed b/design/SelectedMSIloci2019Sorted.bed new file mode 100644 index 0000000..1d8f0ad --- /dev/null +++ b/design/SelectedMSIloci2019Sorted.bed @@ -0,0 +1,507 @@ +chr1 6257784 6257792 GMS_MSI_26 +chr1 14108748 14108757 GMS_MSI_313 +chr1 16200729 16200739 TSO500_1 +chr1 23240245 23240254 GMS_MSI_345 +chr1 23636874 23636885 GMS_MSI_384 +chr1 24078403 24078411 GMS_MSI_342 +chr1 27621107 27621115 GMS_MSI_272 +chr1 27992800 27992823 GMS_MSI_311 +chr1 28785729 28785739 GMS_MSI_273 +chr1 28929961 28929972 GMS_MSI_135 +chr1 32384716 32384727 GMS_MSI_188 +chr1 35846959 35846968 GMS_MSI_208 +chr1 40361307 40361317 TSO500_2 +chr1 45407181 45407190 GMS_MSI_206 +chr1 47325299 47325312 GMS_MSI_49 +chr1 61543222 61543230 GMS_MSI_160 +chr1 74575212 74575221 GMS_MSI_301 +chr1 78414310 78414328 GMS_MSI_115 +chr1 85624414 85624423 GMS_MSI_200 +chr1 86965769 86965777 GMS_MSI_328 +chr1 89473441 89473451 GMS_MSI_202 +chr1 93667515 93667524 GMS_MSI_252 +chr1 94018103 94018113 GMS_MSI_183 +chr1 100534121 100534129 GMS_MSI_198 +chr1 110906426 110906435 GMS_MSI_245 +chr1 114226705 114226718 GMS_MSI_33 +chr1 115537600 115537610 GMS_MSI_221 +chr1 116655183 116655196 GMS_MSI_97 +chr1 118502087 118502098 GMS_MSI_83 +chr1 153516162 153516172 GMS_MSI_192 +chr1 155307999 155308008 GMS_MSI_176 +chr1 156842471 156842485 TSO500_3 +chr1 159032486 159032496 GMS_MSI_90 +chr1 159166612 159166623 GMS_MSI_218 +chr1 160589600 160589609 GMS_MSI_155 +chr1 161091814 161091831 GMS_MSI_220 +chr1 167385178 167385193 GMS_MSI_320 +chr1 185703899 185703907 GMS_MSI_280 +chr1 193038176 193038185 GMS_MSI_237 +chr1 197898395 197898407 GMS_MSI_351 +chr1 202407189 202407199 GMS_MSI_238 +chr1 204375119 204375130 GMS_MSI_217 +chr1 221875661 221875672 GMS_MSI_174 +chr1 231131566 231131575 GMS_MSI_154 +chr1 235507466 235507485 GMS_MSI_40 +chr1 236714292 236714310 GMS_MSI_96 +chr1 237060945 237060960 GMS_MSI_11 +chr1 239881908 239881918 TSO500_4 +chr1 243666403 243666413 TSO500_5 +chr1 243667925 243667937 TSO500_6 +chr10 18940185 18940196 GMS_MSI_137 +chr10 21807469 21807482 GMS_MSI_39 +chr10 23730496 23730506 GMS_MSI_87 +chr10 52566432 52566444 GMS_MSI_304 +chr10 60148569 60148579 GMS_MSI_70 +chr10 74653468 74653478 GMS_MSI_68 +chr10 78729785 78729794 GMS_MSI_255 +chr10 89650474 89650489 TSO500_76 +chr10 89725293 89725304 GMS_MSI_203 +chr10 90034667 90034678 GMS_MSI_358 +chr10 93601945 93601954 GMS_MSI_248 +chr10 97951714 97951722 GMS_MSI_251 +chr10 98336474 98336482 GMS_MSI_295 +chr10 102035182 102035192 GMS_MSI_156 +chr10 105885525 105885540 GMS_MSI_148 +chr10 111893349 111893357 GMS_MSI_290 +chr10 114925316 114925325 GMS_MSI_321 +chr10 116735234 116735246 GMS_MSI_178 +chr10 120896685 120896707 GMS_MSI_53 +chr10 121335156 121335165 GMS_MSI_193 +chr10 123240429 123240439 TSO500_77 +chr10 123320129 123320155 TSO500_78 +chr11 5799651 5799661 GMS_MSI_277 +chr11 18231788 18231798 GMS_MSI_110 +chr11 26581382 26581422 GMS_MSI_74 +chr11 26692594 26692611 GMS_MSI_271 +chr11 36397655 36397667 GMS_MSI_375 +chr11 36601096 36601108 GMS_MSI_38 +chr11 40135878 40135887 GMS_MSI_207 +chr11 43515493 43515502 GMS_MSI_187 +chr11 55065031 55065040 GMS_MSI_162 +chr11 55653609 55653617 GMS_MSI_332 +chr11 58892376 58892386 GMS_MSI_20 +chr11 60161438 60161450 GMS_MSI_363 +chr11 62649528 62649536 GMS_MSI_259 +chr11 63149670 63149681 GMS_MSI_47 +chr11 67165932 67165941 GMS_MSI_261 +chr11 69517514 69517524 TSO500_79 +chr11 73387527 73387539 GMS_MSI_51 +chr11 75316787 75316798 GMS_MSI_257 +chr11 77784146 77784155 GMS_MSI_81 +chr11 89722014 89722022 GMS_MSI_253 +chr11 94696474 94696484 GMS_MSI_296 +chr11 102193508 102193534 TSO500_80 +chr11 104879686 104879696 GMS_MSI_18 +chr11 105481597 105481616 GMS_MSI_149 +chr11 115047032 115047046 GMS_MSI_6 +chr11 117222649 117222658 GMS_MSI_194 +chr11 118047234 118047243 GMS_MSI_179 +chr11 118220582 118220591 GMS_MSI_322 +chr11 123777441 123777449 GMS_MSI_242 +chr11 125490765 125490786 TSO500_81 +chr11 125501592 125501603 TSO500_82 +chr11 125502523 125502533 TSO500_83 +chr11 125536881 125536892 TSO500_84 +chr11 125763610 125763623 GMS_MSI_7 +chr11 126137086 126137094 GMS_MSI_103 +chr11 128681586 128681601 TSO500_85 +chr12 4483815 4483830 TSO500_86 +chr12 4548825 4548836 TSO500_87 +chr12 6994518 6994533 GMS_MSI_278 +chr12 7045891 7045938 GMS_MSI_215 +chr12 7187784 7187795 GMS_MSI_166 +chr12 11183946 11183955 GMS_MSI_214 +chr12 12013498 12013509 TSO500_88 +chr12 12017687 12017699 TSO500_89 +chr12 13364426 13364436 GMS_MSI_52 +chr12 31435608 31435619 GMS_MSI_48 +chr12 42835328 42835343 GMS_MSI_170 +chr12 48458895 48458903 GMS_MSI_263 +chr12 49315300 49315315 GMS_MSI_372 +chr12 55038408 55038431 GMS_MSI_25 +chr12 55759485 55759493 GMS_MSI_334 +chr12 55820958 55820970 GMS_MSI_258 +chr12 56295236 56295252 GMS_MSI_365 +chr12 57422572 57422580 GMS_MSI_336 +chr12 58142004 58142018 TSO500_90 +chr12 64812754 64812763 GMS_MSI_118 +chr12 66531936 66531946 GMS_MSI_367 +chr12 68054877 68054889 GMS_MSI_73 +chr12 69226469 69226480 TSO500_91 +chr12 69230735 69230753 TSO500_92 +chr12 70747693 70747718 GMS_MSI_331 +chr12 80169697 80169710 GMS_MSI_117 +chr12 85638645 85638655 GMS_MSI_201 +chr12 101779990 101780005 GMS_MSI_181 +chr12 121014513 121014522 GMS_MSI_222 +chr12 130883554 130883567 GMS_MSI_45 +chr13 28962591 28962602 TSO500_93 +chr13 31035467 31035477 GMS_MSI_343 +chr13 33344887 33344896 GMS_MSI_136 +chr13 50587654 50587676 GMS_MSI_44 +chr13 103381995 103382004 GMS_MSI_140 +chr13 113964898 113964910 TSO500_94 +chr13 115057210 115057219 GMS_MSI_77 +chr14 23567868 23567882 GMS_MSI_101 +chr14 23652346 23652367 TSO500_95 +chr14 24040435 24040444 GMS_MSI_212 +chr14 24769849 24769875 GMS_MSI_230 +chr14 31762500 31762510 GMS_MSI_232 +chr14 35871168 35871177 GMS_MSI_373 +chr14 38062697 38062709 TSO500_96 +chr14 38065032 38065042 TSO500_97 +chr14 38066210 38066228 TSO500_98 +chr14 45693721 45693730 GMS_MSI_124 +chr14 52741746 52741757 GMS_MSI_185 +chr14 53513439 53513451 GMS_MSI_55 +chr14 55612006 55612019 GMS_MSI_368 +chr14 58471378 58471389 GMS_MSI_143 +chr14 64990700 64990713 GMS_MSI_37 +chr14 68964202 68964214 TSO500_99 +chr14 70793015 70793029 GMS_MSI_131 +chr14 75476004 75476014 GMS_MSI_362 +chr14 76420881 76420892 GMS_MSI_299 +chr14 78184281 78184288 GMS_MSI_254 +chr14 88934423 88934432 GMS_MSI_329 +chr14 92597321 92597329 GMS_MSI_227 +chr14 96998621 96998644 GMS_MSI_294 +chr14 96998644 96998652 GMS_MSI_298 +chr14 102276205 102276216 GMS_MSI_246 +chr15 25310192 25310200 GMS_MSI_376 +chr15 31293995 31294006 GMS_MSI_312 +chr15 34639082 34639108 TSO500_100 +chr15 34639463 34639476 TSO500_101 +chr15 37391752 37391764 GMS_MSI_134 +chr15 41060070 41060084 GMS_MSI_186 +chr15 42742956 42742964 GMS_MSI_341 +chr15 45848230 45848246 GMS_MSI_125 +chr15 48634319 48634334 GMS_MSI_133 +chr15 56736722 56736732 GMS_MSI_142 +chr15 64967246 64967254 GMS_MSI_370 +chr15 69072346 69072356 GMS_MSI_141 +chr15 79750585 79750593 GMS_MSI_361 +chr15 83659295 83659309 GMS_MSI_182 +chr15 91304138 91304147 GMS_MSI_360 +chr15 93540315 93540325 TSO500_102 +chr16 3350676 3350686 GMS_MSI_167 +chr16 10867202 10867211 GMS_MSI_213 +chr16 19451284 19451296 GMS_MSI_380 +chr16 29680524 29680538 GMS_MSI_56 +chr16 56704955 56704965 GMS_MSI_303 +chr16 66757487 66757503 GMS_MSI_108 +chr16 69334880 69334892 GMS_MSI_30 +chr16 81954996 81955011 TSO500_103 +chr16 83828683 83828694 GMS_MSI_106 +chr16 85682289 85682297 GMS_MSI_359 +chr17 1326754 1326768 GMS_MSI_28 +chr17 4805179 4805188 GMS_MSI_385 +chr17 4996470 4996488 GMS_MSI_348 +chr17 26653806 26653816 GMS_MSI_172 +chr17 35879008 35879018 GMS_MSI_305 +chr17 41224426 41224437 TSO500_104 +chr17 41609864 41609875 TSO500_105 +chr17 42756252 42756261 GMS_MSI_266 +chr17 55016354 55016368 GMS_MSI_120 +chr17 57247170 57247179 GMS_MSI_335 +chr17 57974277 57974292 TSO500_106 +chr17 57997025 57997036 TSO500_107 +chr17 58024908 58024918 GMS_MSI_72 +chr18 319944 319955 GMS_MSI_41 +chr18 649879 649894 GMS_MSI_5 +chr18 18533678 18533686 GMS_MSI_275 +chr18 20572852 20572861 GMS_MSI_314 +chr18 21750330 21750338 GMS_MSI_383 +chr18 30913142 30913152 GMS_MSI_9 +chr18 32888074 32888089 GMS_MSI_85 +chr18 32917176 32917188 GMS_MSI_231 +chr18 44682385 44682396 GMS_MSI_211 +chr18 56985739 56985749 GMS_MSI_366 +chr18 57013193 57013202 GMS_MSI_82 +chr18 57571785 57571800 TSO500_108 +chr18 72516095 72516106 GMS_MSI_228 +chr19 4795390 4795405 GMS_MSI_173 +chr19 9361740 9361751 GMS_MSI_67 +chr19 11919196 11919211 GMS_MSI_58 +chr19 11944947 11944955 GMS_MSI_95 +chr19 14104688 14104702 GMS_MSI_16 +chr19 14628247 14628258 TSO500_109 +chr19 30307062 30307080 TSO500_110 +chr19 30310150 30310160 TSO500_111 +chr19 30311984 30311995 TSO500_112 +chr19 35758789 35758800 GMS_MSI_229 +chr19 38161161 38161172 GMS_MSI_163 +chr19 49850472 49850480 GMS_MSI_262 +chr19 57769066 57769091 GMS_MSI_59 +chr19 58118715 58118731 GMS_MSI_369 +chr2 8998775 8998787 GMS_MSI_19 +chr2 10269544 10269554 GMS_MSI_276 +chr2 14778337 14778358 GMS_MSI_57 +chr2 16076307 16076324 TSO500_7 +chr2 16083525 16083540 TSO500_8 +chr2 17898125 17898134 GMS_MSI_153 +chr2 25505023 25505035 TSO500_9 +chr2 37430153 37430161 GMS_MSI_309 +chr2 42557759 42557775 TSO500_10 +chr2 48030639 48030647 GMS_MSI_151 +chr2 55863360 55863371 GMS_MSI_119 +chr2 68511506 68511518 GMS_MSI_116 +chr2 68691328 68691336 GMS_MSI_204 +chr2 88056970 88056981 GMS_MSI_79 +chr2 96994050 96994060 GMS_MSI_330 +chr2 99614595 99614608 GMS_MSI_65 +chr2 99936109 99936118 GMS_MSI_247 +chr2 103378581 103378597 GMS_MSI_17 +chr2 111884996 111885015 TSO500_11 +chr2 111886180 111886198 TSO500_12 +chr2 113982124 113982142 TSO500_13 +chr2 113991269 113991279 TSO500_14 +chr2 118854094 118854107 GMS_MSI_128 +chr2 145146982 145146991 GMS_MSI_175 +chr2 148683685 148683693 GMS_MSI_22 +chr2 152108087 152108097 GMS_MSI_286 +chr2 158390343 158390353 GMS_MSI_353 +chr2 165551295 165551304 GMS_MSI_29 +chr2 173686465 173686489 GMS_MSI_350 +chr2 178402954 178402964 GMS_MSI_279 +chr2 178988919 178988928 GMS_MSI_191 +chr2 201448283 201448293 GMS_MSI_352 +chr2 203922057 203922066 GMS_MSI_127 +chr2 206980714 206980723 GMS_MSI_316 +chr2 207174427 207174436 GMS_MSI_190 +chr2 222290623 222290634 GMS_MSI_349 +chr2 223066017 223066025 GMS_MSI_236 +chr2 223066536 223066551 GMS_MSI_35 +chr2 223067411 223067422 TSO500_15 +chr2 223067864 223067875 TSO500_16 +chr2 223071111 223071123 TSO500_17 +chr2 223083525 223083535 TSO500_18 +chr2 234638282 234638290 GMS_MSI_235 +chr20 1350025 1350037 GMS_MSI_64 +chr20 29633966 29633976 GMS_MSI_122 +chr20 33054129 33054138 GMS_MSI_164 +chr20 35869801 35869811 GMS_MSI_339 +chr20 44470648 44470661 GMS_MSI_66 +chr20 47858503 47858511 GMS_MSI_32 +chr20 49508203 49508211 GMS_MSI_265 +chr20 58467046 58467055 GMS_MSI_184 +chr20 58497481 58497496 GMS_MSI_10 +chr20 58587783 58587793 GMS_MSI_15 +chr21 10944696 10944704 GMS_MSI_347 +chr21 16338329 16338337 GMS_MSI_381 +chr21 30339205 30339216 GMS_MSI_86 +chr21 33974094 33974108 GMS_MSI_100 +chr21 38524242 38524250 GMS_MSI_171 +chr21 42862134 42862147 TSO500_113 +chr21 42863078 42863102 TSO500_114 +chr21 44195537 44195550 GMS_MSI_310 +chr21 44513110 44513121 GMS_MSI_307 +chr22 23633394 23633411 TSO500_115 +chr22 23634614 23634624 TSO500_116 +chr22 29100277 29100287 TSO500_117 +chr22 29100299 29100309 TSO500_118 +chr22 29678749 29678764 TSO500_119 +chr22 29682881 29682893 TSO500_120 +chr22 29696468 29696484 TSO500_121 +chr22 36662141 36662153 GMS_MSI_267 +chr22 39069285 39069294 GMS_MSI_268 +chr22 39079920 39079935 GMS_MSI_21 +chr3 12396639 12396649 TSO500_19 +chr3 12401173 12401191 TSO500_20 +chr3 12404378 12404388 TSO500_21 +chr3 12407830 12407842 TSO500_22 +chr3 12409184 12409195 TSO500_23 +chr3 12411792 12411803 TSO500_24 +chr3 12415161 12415172 TSO500_25 +chr3 12417447 12417460 TSO500_26 +chr3 12639509 12639524 TSO500_27 +chr3 12699267 12699279 TSO500_28 +chr3 20216049 20216058 GMS_MSI_165 +chr3 30691871 30691881 GMS_MSI_2 +chr3 32411483 32411492 GMS_MSI_378 +chr3 42251577 42251609 GMS_MSI_374 +chr3 43647212 43647221 GMS_MSI_337 +chr3 56657045 56657054 GMS_MSI_302 +chr3 71007462 71007472 TSO500_29 +chr3 100039735 100039744 GMS_MSI_129 +chr3 113377481 113377492 GMS_MSI_1 +chr3 114027065 114027097 GMS_MSI_324 +chr3 122433231 122433241 GMS_MSI_323 +chr3 123332875 123332891 GMS_MSI_8 +chr3 130733046 130733057 GMS_MSI_50 +chr3 136573485 136573494 GMS_MSI_23 +chr3 142274739 142274749 GMS_MSI_3 +chr3 178891366 178891376 TSO500_30 +chr3 195784813 195784824 TSO500_31 +chr4 3015469 3015478 GMS_MSI_234 +chr4 3430398 3430407 GMS_MSI_346 +chr4 9785354 9785365 GMS_MSI_60 +chr4 15938177 15938186 GMS_MSI_274 +chr4 15995679 15995687 GMS_MSI_344 +chr4 48636434 48636443 GMS_MSI_264 +chr4 56336953 56336962 GMS_MSI_27 +chr4 57220268 57220278 GMS_MSI_31 +chr4 70160632 70160643 GMS_MSI_114 +chr4 83740163 83740174 GMS_MSI_225 +chr4 83785564 83785573 GMS_MSI_12 +chr4 93225752 93225764 GMS_MSI_78 +chr4 95508281 95508292 GMS_MSI_199 +chr4 106162144 106162154 GMS_MSI_84 +chr4 106163095 106163110 GMS_MSI_147 +chr4 113578482 113578492 GMS_MSI_326 +chr4 158142151 158142160 GMS_MSI_89 +chr4 160189200 160189211 GMS_MSI_71 +chr4 177100754 177100765 GMS_MSI_138 +chr4 186272694 186272702 GMS_MSI_281 +chr5 32404160 32404169 GMS_MSI_270 +chr5 32786465 32786476 GMS_MSI_145 +chr5 36985082 36985090 GMS_MSI_340 +chr5 37752731 37752741 GMS_MSI_152 +chr5 44332084 44332094 TSO500_32 +chr5 54603686 54603699 GMS_MSI_371 +chr5 58270457 58270469 GMS_MSI_132 +chr5 64886193 64886202 GMS_MSI_260 +chr5 67584512 67584524 GMS_MSI_13 +chr5 78671727 78671746 GMS_MSI_300 +chr5 79970914 79970922 GMS_MSI_24 +chr5 82937251 82937261 GMS_MSI_293 +chr5 83239132 83239147 GMS_MSI_130 +chr5 88018388 88018401 GMS_MSI_107 +chr5 121362852 121362863 GMS_MSI_195 +chr5 122359467 122359479 GMS_MSI_177 +chr5 122359502 122359532 GMS_MSI_91 +chr5 131931451 131931460 GMS_MSI_357 +chr5 134086670 134086683 GMS_MSI_105 +chr5 134907432 134907475 GMS_MSI_169 +chr5 137451361 137451371 GMS_MSI_285 +chr5 139494846 139494861 GMS_MSI_46 +chr5 142046340 142046350 TSO500_33 +chr5 145647319 145647328 GMS_MSI_75 +chr5 145886722 145886730 GMS_MSI_318 +chr5 151771613 151771626 GMS_MSI_284 +chr5 158526596 158526607 GMS_MSI_282 +chr5 161494990 161495002 GMS_MSI_76 +chr5 162917425 162917434 GMS_MSI_319 +chr5 162945387 162945399 GMS_MSI_88 +chr6 10756863 10756874 GMS_MSI_315 +chr6 11714639 11714653 GMS_MSI_4 +chr6 20443198 20443211 TSO500_34 +chr6 20489704 20489714 TSO500_35 +chr6 49459994 49460004 GMS_MSI_94 +chr6 50681660 50681670 GMS_MSI_144 +chr6 54130829 54130843 GMS_MSI_14 +chr6 71508369 71508379 GMS_MSI_80 +chr6 71571694 71571706 GMS_MSI_42 +chr6 80751896 80751905 GMS_MSI_158 +chr6 84896232 84896240 GMS_MSI_226 +chr6 88853530 88853541 GMS_MSI_150 +chr6 90432674 90432682 GMS_MSI_249 +chr6 91226169 91226178 GMS_MSI_250 +chr6 100382357 100382366 GMS_MSI_112 +chr6 108214754 108214764 GMS_MSI_157 +chr6 111587360 111587369 GMS_MSI_92 +chr6 117642992 117643012 TSO500_36 +chr6 131481275 131481283 GMS_MSI_241 +chr6 135526367 135526383 TSO500_37 +chr6 135528875 135528890 TSO500_38 +chr6 135529684 135529701 TSO500_39 +chr6 135535469 135535480 TSO500_40 +chr6 135538507 135538517 TSO500_41 +chr6 136172987 136173009 GMS_MSI_219 +chr6 136878751 136878765 GMS_MSI_354 +chr6 139097329 139097337 GMS_MSI_317 +chr6 161132742 161132750 GMS_MSI_239 +chr6 163991926 163991943 GMS_MSI_355 +chr7 12729917 12729939 GMS_MSI_63 +chr7 13933779 13933794 TSO500_42 +chr7 13948213 13948223 TSO500_43 +chr7 13948761 13948778 TSO500_44 +chr7 13979986 13979996 TSO500_45 +chr7 13981645 13981666 TSO500_46 +chr7 13985068 13985080 TSO500_47 +chr7 13985131 13985141 TSO500_48 +chr7 13988790 13988801 TSO500_49 +chr7 13995946 13995957 TSO500_50 +chr7 13998668 13998683 TSO500_51 +chr7 13999552 13999563 TSO500_52 +chr7 14000770 14000780 TSO500_53 +chr7 14005078 14005089 TSO500_54 +chr7 14010553 14010563 TSO500_55 +chr7 14011740 14011750 TSO500_56 +chr7 14023246 14023259 TSO500_57 +chr7 14023339 14023349 TSO500_58 +chr7 14023641 14023652 TSO500_59 +chr7 14028189 14028200 TSO500_60 +chr7 23545119 23545139 GMS_MSI_102 +chr7 30673512 30673527 GMS_MSI_109 +chr7 35944036 35944047 GMS_MSI_306 +chr7 54819993 54820004 GMS_MSI_104 +chr7 55233857 55233867 TSO500_61 +chr7 55237260 55237270 TSO500_62 +chr7 64152284 64152292 GMS_MSI_364 +chr7 77423459 77423468 GMS_MSI_159 +chr7 92452410 92452423 TSO500_63 +chr7 108205525 108205534 GMS_MSI_196 +chr7 110764988 110765001 GMS_MSI_111 +chr7 140438766 140438782 TSO500_64 +chr7 140489019 140489029 TSO500_65 +chr7 151874147 151874156 GMS_MSI_168 +chr8 17579504 17579517 GMS_MSI_382 +chr8 23712066 23712078 GMS_MSI_43 +chr8 25287254 25287264 GMS_MSI_269 +chr8 32077663 32077673 TSO500_66 +chr8 37791833 37791842 GMS_MSI_210 +chr8 38705639 38705650 GMS_MSI_209 +chr8 48866909 48866919 GMS_MSI_34 +chr8 74507470 74507478 GMS_MSI_256 +chr8 91637753 91637765 GMS_MSI_224 +chr8 95686610 95686618 GMS_MSI_297 +chr8 102701456 102701471 GMS_MSI_93 +chr8 103289348 103289356 GMS_MSI_36 +chr8 104831718 104831727 GMS_MSI_327 +chr8 109214083 109214093 GMS_MSI_325 +chr8 118811806 118811817 GMS_MSI_180 +chr8 120744283 120744295 GMS_MSI_288 +chr8 128744289 128744300 TSO500_67 +chr8 128744519 128744532 TSO500_68 +chr8 128751902 128751915 TSO500_69 +chr8 145689658 145689667 GMS_MSI_283 +chr9 19372237 19372246 GMS_MSI_233 +chr9 27062802 27062815 GMS_MSI_121 +chr9 32633583 32633591 GMS_MSI_377 +chr9 33364821 33364832 GMS_MSI_189 +chr9 34088273 34088283 GMS_MSI_379 +chr9 35059646 35059655 GMS_MSI_338 +chr9 68427818 68427825 GMS_MSI_333 +chr9 79999547 79999580 GMS_MSI_205 +chr9 86584222 86584233 GMS_MSI_99 +chr9 87357642 87357652 TSO500_70 +chr9 87430433 87430449 TSO500_71 +chr9 87479651 87479673 TSO500_72 +chr9 87487518 87487529 TSO500_73 +chr9 87636617 87636627 TSO500_74 +chr9 87641845 87641857 TSO500_75 +chr9 95237024 95237068 GMS_MSI_113 +chr9 97063725 97063736 GMS_MSI_223 +chr9 100092968 100092983 GMS_MSI_292 +chr9 100700505 100700516 GMS_MSI_197 +chr9 100777784 100777798 GMS_MSI_98 +chr9 114694383 114694393 GMS_MSI_139 +chr9 115806415 115806423 GMS_MSI_287 +chr9 125273385 125273392 GMS_MSI_216 +chr9 129596297 129596308 GMS_MSI_243 +chr9 131591119 131591128 GMS_MSI_244 +chrX 15364158 15364168 GMS_MSI_126 +chrX 37312610 37312618 GMS_MSI_308 +chrX 38664817 38664830 GMS_MSI_62 +chrX 48895224 48895242 TSO500_122 +chrX 54471045 54471055 GMS_MSI_161 +chrX 62974288 62974300 GMS_MSI_123 +chrX 100668932 100668945 GMS_MSI_54 +chrX 101138438 101138449 GMS_MSI_61 +chrX 105937255 105937263 GMS_MSI_291 +chrX 109416688 109416702 GMS_MSI_289 +chrX 119390643 119390657 GMS_MSI_69 +chrX 134680316 134680324 GMS_MSI_356 +chrX 153906377 153906393 GMS_MSI_146 +chrX 154157685 154157693 GMS_MSI_240