From 2ced1c8bb2c4a5edcdc34fe3ea9289733f21dece Mon Sep 17 00:00:00 2001 From: jonca79 Date: Mon, 20 Nov 2023 17:04:31 +0100 Subject: [PATCH 1/2] feat: file for rna fusionreport filtering --- rna_fusion/filter_rna_fusions_20231020.txt | 23 ++++++++++++++++++++++ 1 file changed, 23 insertions(+) create mode 100644 rna_fusion/filter_rna_fusions_20231020.txt diff --git a/rna_fusion/filter_rna_fusions_20231020.txt b/rna_fusion/filter_rna_fusions_20231020.txt new file mode 100644 index 0000000..d946e33 --- /dev/null +++ b/rna_fusion/filter_rna_fusions_20231020.txt @@ -0,0 +1,23 @@ +GAPDH housekeeping 20 20 +GUSB housekeeping 20 20 +OAZ1 housekeeping 20 20 +POLR2A housekeeping 20 20 +MAML2 FRMPD3 20 20 +MAML2 NCOA6 20 20 +MAML2 ATXN3 20 20 +MAML2 SRP14 20 20 +MAML2 KMT2D 20 20 +MAML2 CHD1 20 20 +MAML2 NFAT5 20 20 +MAML2 FOXP2 20 20 +MAML2 NUMBL 20 20 +MAML2 GLG1 20 20 +MAML2 VEZF1 20 20 +MAML2 AAK1 20 20 +MAML2 NCOR2 20 20 +MAML2 ARID1B 25 25 +MAML2 FRMPD3 40 40 +MAML2 MAGI1 20 20 +MAML2 CEP57 20 20 +MAML2 PHLDA1 20 20 +MAML2 ZFHX3 20 20 From 3e84240813165c91c6f00d0c876e4bb4a4c859bd Mon Sep 17 00:00:00 2001 From: Patrik Smeds Date: Thu, 23 Nov 2023 14:49:02 +0100 Subject: [PATCH 2/2] docs: add header to filter file --- rna_fusion/filter_rna_fusions_20231020.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/rna_fusion/filter_rna_fusions_20231020.txt b/rna_fusion/filter_rna_fusions_20231020.txt index d946e33..e650b97 100644 --- a/rna_fusion/filter_rna_fusions_20231020.txt +++ b/rna_fusion/filter_rna_fusions_20231020.txt @@ -1,3 +1,4 @@ +#gene1 gene2 read_limit_SF read_limit_FC GAPDH housekeeping 20 20 GUSB housekeeping 20 20 OAZ1 housekeeping 20 20