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Oxford Computational Biochemistry course

This repository contains the teaching materials for the Oxford Computational Biochemistry course. This two and half day course is aimed at graduate students who have had no prior experience in the area of Computational Biochemistry. It assumes no prior knowledge and only tries to cover basic concepts.

Tutorials

1) Molecular Dynamics

2) Python Binder

A set of jupyter notebooks which aim to teach the basics of python programming assuming no prior knowledge. First introducing core concepts such as variables, loops, conditionals and lists, we eventually demonstrate how Molecular Dynamics simulations can be analysed using python libraries such as MDAnalysis and NGLView.

3) Homology Modelling

4) Molecular Docking

Acknowledgements

The Oxford Computational Biochemistry course has been written by several authors over several years. Please see individual tutorials for contributor logs.

Course leader: Professor Philip C. Biggin