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automating creating the yaml file #21

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evelyn-schmidt opened this issue Jun 14, 2024 · 0 comments
Open

automating creating the yaml file #21

evelyn-schmidt opened this issue Jun 14, 2024 · 0 comments

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@evelyn-schmidt
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  • give a directory with the tumor_dna, tumor_rna, and normal_dna
  • use pyyaml package?
  • give option for user to supply the path the location of the files
  • has to handle data on both google cloud (JLF) and local file structure (WashU)
  • also have the user supply where the data is from. e.i. washu, bostongene, cegat etc
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