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I was trying to access the peptide sequences translated from a set of transcripts. After running the query I manually compared referenced a few transcripts with the sequences available on Uniprot. For most of the transcripts, they matched perfectly, but in some cases there was an additional residue at the end of the sequence provided by biomaRt. Could you look into that?
I was trying to access the peptide sequences translated from a set of transcripts. After running the query I manually compared referenced a few transcripts with the sequences available on Uniprot. For most of the transcripts, they matched perfectly, but in some cases there was an additional residue at the end of the sequence provided by biomaRt. Could you look into that?
Here is an example:
Sequences from uniprot are downloaded from:
https://www.uniprot.org/uniprotkb/C9J6H4/entry#sequences
https://www.uniprot.org/uniprotkb/H3BR90/entry#sequences
Versions:
R 4.4.0
biomaRt 2.60.1
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