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GEDI package #77
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Hi @Maryan12m , It's hard to know what the issue is without some more information, and I don't know the GEDI package to suggest any advice for that specifically. I'd suggest taking a look at the biomaRt vignette (https://bioconductor.org/packages/release/bioc/vignettes/biomaRt/inst/doc/accessing_ensembl.html) and seeing if you can run any of the examples in there. If that code works for you then the issue probably lies with GEDI. If you still get errors then it's a biomaRt issue and I might be able to help more. I'd suggest running Section 2 in that vignette, and then trying some of the examples in section 6. You should be able to copy and paste the code and get back the same results you see in that document. If you get some errors, please report them here. |
HI Mike Smith, But I have a question about probe IDs: Below is a part of the code for humans, but I don't know what I should choose in the attribute and filter section for the cow species: Please advise. |
Hello
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