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Fayalite-FIST

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Fayalite-FIST

Description

This is a short molecular dynamics run of 1'000 time steps in a NPT ensemble at 300K. It consists of 28'000 atoms - a 103 supercell with 28 atoms of iron silicate (Fe2SiO4, also known as Fayalite) per unit cell. The simulation employs a classical potential (Morse with a hard-core repulsive term and 5.5 angstrom cutoff) with long-range electrostatics using Smoothed Particle Mesh Ewald (SPME) summation. While CP2K does support classical potentials via the Frontiers In Simulation Technology (FIST) module, this is not a typical calculation for CP2K but is included to give an impression of the performance difference between machines for the MM part of a QM/MM calculation.

Benchmarks

Results

The best configurations are shown below. Click the links under "Detailed Results" to see more detail.

Machine Name Architecture Date SVN Revision Fastest time (s) Number of Cores Number of Threads Detailed Results
HECToR Cray XE6 21/1/2014 13196 403.928 512 cores 2 OMP threads per MPI task hector-h2o-64
ARCHER Cray XC30 9/1/2014 13473 197.117 576 cores 1 OMP thread per MPI task archer-h2o-64
Magnus Cray XC40 6/11/2014 14377 150.493 384 cores 1 OMP thread per MPI task magnus-h2o-64
Piz Daint Cray XC30 12/05/2015 15268 207.972 192 cores 1 OMP thread per MPI task, no GPU piz-daint-h2o-64
Cirrus SGI ICE XA 24/11/2016 7566 166.192 1152 cores 9 OMP threads per MPI task cirrus-h2o-64
Noctua Cray CS500 25/09/2019 9f58d81 119.820 640 cores 10 OMP thread per MPI task noctua-h2o-64