isoLASER performs gene-level variant calls, phasing, and splicing linkage analysis using third-generation RNA sequencing data.
Documentation for the isoLASER software here.
The snakemake files show the workflow used in our manuscript to process and analyze the sequencing data.
- s1: Preprocessing of bam files
- s2: Isoform prediction using TALON
- s3: Running isoLASER
- s4: Running isoLASER joint