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This is indeed an apparent conflict, though in practice, gilda works without issues with markupsafe==2.0.1, and also, even in INDRA, this is only a potential issue if one wants to run its REST API locally which is not common. I am looking into solving this by changing the dependency structure in INDRA, but still, I don't think this is causing any practical issues.
indra depends on markupsafe<2.1.0
gilda depends on flask>=3.0 depends on Werkzeug>=3.0.0 depends on MarkupSafe>=2.1.1
short-term workaround: use gilda < 1.1.0
long-term recommendation: automated nightly integration smoke tests
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