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Z-surface and restraints definition #13

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VGPReys opened this issue Mar 22, 2024 · 2 comments · Fixed by haddocking/haddock3#839 or #14
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Z-surface and restraints definition #13

VGPReys opened this issue Mar 22, 2024 · 2 comments · Fixed by haddocking/haddock3#839 or #14
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@VGPReys
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enhancement New feature or request

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@VGPReys
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VGPReys commented Mar 22, 2024 •
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Would be nice to have:

  • a dedicated tool the generate shape beads in a Z surface
  • corresponding restraints to make a protein sit flat
@VGPReys VGPReys self-assigned this Mar 22, 2024
@amjjbonvin
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Actually the plane should be defined on the x,y plane and centered at the origin. Also if multiple planes are generated, they should be spread in the z direction, both in the negative and positive directions

@VGPReys VGPReys mentioned this issue Mar 27, 2024
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@VGPReys VGPReys changed the title Z-plan and restraints definition Z-surface and restraints definition Mar 27, 2024
@rvhonorato
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I'm going to transfer this issue to haddock-restraints and we handle it there

@rvhonorato rvhonorato transferred this issue from haddocking/haddock3 Aug 5, 2024
@rvhonorato rvhonorato added the enhancement New feature or request label Aug 5, 2024
@rvhonorato rvhonorato linked a pull request Aug 5, 2024 that will close this issue
add Z subcommand #14
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enhancement New feature or request
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z-surface restraints scripts haddocking/haddock3
add Z subcommand haddocking/haddock-restraints
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@amjjbonvin @rvhonorato @VGPReys