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Variants do not support ends #440

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Georgehe4 opened this issue Oct 27, 2016 · 3 comments
Open

Variants do not support ends #440

Georgehe4 opened this issue Oct 27, 2016 · 3 comments

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@Georgehe4
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The variant type structure in main/vcf.js supports only a starting position without an ending position.
@Georgehe4
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Georgehe4 commented Oct 27, 2016 •
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Resolved - encoded in ref and alt alleles

@Georgehe4
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Reopening - variant specification should include an end.

@Georgehe4 Georgehe4 reopened this Oct 27, 2016
@armish
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armish commented Nov 8, 2016

@Georgehe4: can you let me know why you need the end coordinates? The variant track is currently tailored towards showing single nucleotide variants and the main/vcf.js reflects that as the end coordinate is not needed for that type of variants.

Happy to get this in, but just need more information about how/why it will be used before adding this support.

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@armish @Georgehe4