_pkgdown.yml

authors:
  Michael Steinbaugh:
    href: https://mike.steinbaugh.com/
  Lorena Pantano:
    href: https://lpantano.github.io/
  Rory Kirchner:
    href: https://github.com/roryk/
  Victor Barrera:
    href: https://github.com/vbarrera/
  Brad Chapman:
    href: https://github.com/chapmanb/
  Mary Piper:
    href: https://github.com/marypiper/
  Meeta Mistry:
    href: https://github.com/mistrm82/
  Radhika Khetani:
    href: https://github.com/rkhetani/
  Kayleigh Rutherford:
    href: https://github.com/KayleighRutherford/
  Oliver Hofmann:
    href: https://github.com/ohofmann/
  John Hutchinson:
    href: https://github.com/jnhutchinson/
  Shannan Ho Sui:
    href: https://github.com/sjhosui/
  Harvard Chan Bioinformatics Core:
    href: https://bioinformatics.sph.harvard.edu/
  Acid Genomics:
    href: https://acidgenomics.com/
navbar:
  components:
    acid:
      icon: 'fas fa-vial fa-lg'
      href: https://acidgenomics.com/
  structure:
    right: [acid, github]
news:
  - one_page: false
reference:
  - title: S4 classes
    contents:
      - starts_with("bcbioRNASeq")
      - coerce
      - extract
      - show
      - updateObject
  - title: Counts
    contents:
      - counts
      - relativeLogExpression
      - slotAlignedCounts
      - tmm
  - title: Plots
    contents:
      - starts_with("plot")
  - title: Example data
    contents:
      - bcb
  - title: Reexports
    contents:
      - reexports
template:
  bootstrap: 5
url: https://r.acidgenomics.com/packages/bcbiornaseq