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Patient: add gender identity, individual pronous, and sex assigned at birth #19

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dt-r opened this issue Apr 10, 2024 · 4 comments · May be fixed by #53
Open

Patient: add gender identity, individual pronous, and sex assigned at birth #19

dt-r opened this issue Apr 10, 2024 · 4 comments · May be fixed by #53
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@heathfrankel @StephThaoOng
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bug Something isn't working core-connectathon-2024

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@dt-r
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dt-r commented Apr 10, 2024

Enhance the set of Patient sample data to:

  1. add individual pronouns to 20% of the set
  2. add gender identity to 20% of the set
  3. add sex assigned at birth to 20% of the set

Ensure:

  1. avoid biased data and provide variation e.g. gender, pronoun, sex should not consistently be always male, him/his, male
  2. have some resources with just one of the above, some with two, some with all
  3. the patient resources that have clinical resources associated end up with some patients that have one, two, or three of the inclusions
@michael-wilson-au michael-wilson-au added the bug Something isn't working label Jun 28, 2024
@michael-wilson-au
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Patient.csv contains patients with pronouns and recorded sex or gender however they are not mapped to the generated json. Patient test data with pronouns and recorded sex or gender is required for AU Core test events.

@StephThaoOng
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23/9 Sparked Infra&Tooling meeting: Suggested @JayMurdoch could support with resolving this ticket and use as a test run for Test Data - Creating and Generating using Spreadsheet instructions.
@heath is happy to support with any queries about the test data spreadsheet.

@StephThaoOng
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24/9: De-assigned pending project planning

@StephThaoOng
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@heathfrankel I've added gender identity, individual pronouns, and sex assigned at birth to the Patient sheet of AU Core Test Data.xlsx that meet the reqs originally noted by dt-r.

I've added to new columns (see CE and CH) to this sheet.
Can I please hand over to update the Csv2FhirMapping?

heathfrankel added a commit that referenced this issue Sep 25, 2024
@heathfrankel
#19 generated Patient resources with gender identity, pronouns and se…
a9fd6c0 
…x at birth extensions
heathfrankel added a commit that referenced this issue Sep 25, 2024
@heathfrankel
#19 Updated CSV2Patient.map to support additional columns individual_…
7ceff5c 
…genderIdentity_value_text and individual_pronouns_value_text
@heathfrankel heathfrankel linked a pull request Sep 25, 2024 that will close this issue
#19 add gender identity, individual pronouns, and sex assigned at birth #53
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@StephThaoOng StephThaoOng

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#19 add gender identity, individual pronouns, and sex assigned at birth hl7au/au-fhir-test-data
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@heathfrankel @StephThaoOng @michael-wilson-au @dt-r @JayMurdoch