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5191467742 May 14 19:45 HT_processed.h5ad
901948748 May 15 10:23 HT_processed.zip
5910040098 May 14 18:04 LK_raw.h5ad
2229303788 May 15 10:21 LK_raw.zip
Outputting data products as zip stores as opposed to hdf5 serialization results in substantial reductions in file size, which may be meaningful when transferring files over networks or making copies. Files can be pretty easily read and written anndata and zarr like:
import zarr
import anndata
store = zarr.storage.ZipStore(file_path)
adata = anndata.read_zarr(store)
5191467742 May 14 19:45 HT_processed.h5ad
901948748 May 15 10:23 HT_processed.zip
5910040098 May 14 18:04 LK_raw.h5ad
2229303788 May 15 10:21 LK_raw.zip
Outputting data products as zip stores as opposed to hdf5 serialization results in substantial reductions in file size, which may be meaningful when transferring files over networks or making copies. Files can be pretty easily read and written anndata and zarr like:
import zarr
import anndata
store = zarr.storage.ZipStore(file_path)
adata = anndata.read_zarr(store)
or
import zarr
import anndata
store = zarr.storage.ZipStore(file_path)
adata = anndata.AnnData()
adata = anndata.write_zarr(store)
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