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DESCRIPTION
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DESCRIPTION
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Package: epigenomix
Type: Package
Title: Epigenetic and gene transcription data normalization and
integration with mixture models
Version: 1.27.1
Date: 2020-03-18
Author: Hans-Ulrich Klein, Martin Schaefer
Maintainer: Hans-Ulrich Klein <[email protected]>
Depends: R (>= 3.2.0), methods, Biobase, S4Vectors, IRanges, GenomicRanges, SummarizedExperiment
Imports: BiocGenerics, MCMCpack, Rsamtools, parallel, GenomeInfoDb, beadarray
Description: A package for the integrative analysis of RNA-seq or
microarray based gene transcription and histone modification
data obtained by ChIP-seq. The package provides methods for
data preprocessing and matching as well as methods for fitting
bayesian mixture models in order to detect genes with
differences in both data types.
License: LGPL-3
biocViews: ChIPSeq, GeneExpression, DifferentialExpression,
Classification