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Progeny is a method for detecting enrichment of cancer pathways based on gene signatures
Input:
Output:
I'm not sure if Progeny does proper statistical tests by group. If not, perform a simple statistical test, e.g. using a linear model.
Since it does not make sense to run Progeny on all datasets, this should be made optional (e.g. params.run_dorothea) and be disabled by default.
params.run_dorothea
The text was updated successfully, but these errors were encountered:
chripla
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Progeny is a method for detecting enrichment of cancer pathways based on gene signatures
Input:
Output:
I'm not sure if Progeny does proper statistical tests by group. If not, perform a simple statistical test, e.g. using a linear model.
Since it does not make sense to run Progeny on all datasets, this should be made optional (e.g.
params.run_dorothea
) andbe disabled by default.
The text was updated successfully, but these errors were encountered: