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As tumour grading is not applicable to certain cancers, for example blood cancers:
T-cell Lymphoma (EUPTCL-DE)
Multiple Myeloma (MM-KR)
Programs would like to submit Not applicable for tumour_grading_system and tumour_grade.
Because tumour_grade is depend on tumour_grading_system, when tumour_grading_system = Not applicable, tumour_grade shall be Not applicable as well.
After we implement this, we need to modify clinical validation rules to allow tumour_grade = Not applicable, otherwise users will see clinical validation errors, because tumour_grade is a required field.
Note that this is NOT a clinical exception, as it's a valid scientific case.
Buwujiu
changed the title
Feature Request: Allow 'Not applicable' for tumour_grading_system
Feature Request: Allow 'Not applicable' for tumour_grading_system and tumour_grade
Nov 14, 2022
Detailed Description
As tumour grading is not applicable to certain cancers, for example blood cancers:
Programs would like to submit
Not applicable
fortumour_grading_system
andtumour_grade
.Because
tumour_grade
is depend ontumour_grading_system
, whentumour_grading_system
=Not applicable
,tumour_grade
shall beNot applicable
as well.After we implement this, we need to modify clinical validation rules to allow
tumour_grade
=Not applicable
, otherwise users will see clinical validation errors, becausetumour_grade
is a required field.Note that this is NOT a clinical exception, as it's a valid scientific case.
The clinical changes will be done here: icgc-argo/argo-clinical#805
Exit Criteria
when users submit the following combo to clinical system
there should be no dictionary error, this should be a valid case.
Possible Implementation
Not applicable
to the permissible list oftumour_grading_system
.Not applicable
to the permissible list oftumour_grade
.tumour_grade
's validation scrip to allowNot applicable
value whentumour_grading_system
=Not applicable
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