Metadata on gene association datasets available from the GOC, organized by contributor. This drives the new GO association file publishing pipeline:
Soon the contents of this page will be driven by this job
See GO Infrastructure Plan USC 2016 for details
See also geneontology#207
Pipeline configuration: https://github.com/geneontology/go-site/tree/master/pipeline
Anyone can suggest edits to any of the yaml files in this repo (in general the files will be edited either by GO Central, or by a representative from each producer). These edits are made by Pull Requests, which are evaluated by a member of GO Central, and merged if appropriate and the travis tests pass.
Any edit is checked against this schema
- https://build.berkeleybop.org/job/go-gaf-pipeline-NEW/ (not active yet)
- https://build.berkeleybop.org/job/publish-go-site-datasets-json/
This drives the noctua entity ontology which drives selection in noctua
Ultimately, the metadata here will drive pages such as: http://geneontology.org/page/download-annotations
And will also drive loading of Golr and the GO graphstore
See geneontology#207 for more details.
For current plans on GO data architecture see: https://docs.google.com/presentation/d/1TmkHm_gq085_P7jWQCFdo2Y8NTsHGMCSNKAyXCZAsho/edit#slide=id.p4