From 93bc29660b65f9c81d7e67903d8822c4f3e552c5 Mon Sep 17 00:00:00 2001 From: Finlay Maguire Date: Thu, 25 Feb 2021 00:04:06 -0400 Subject: [PATCH] Fix missing zero output for filter_non_human_reads --- scripts/filter_non_human_reads.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/scripts/filter_non_human_reads.py b/scripts/filter_non_human_reads.py index 3195d8a..8f54e0a 100755 --- a/scripts/filter_non_human_reads.py +++ b/scripts/filter_non_human_reads.py @@ -45,7 +45,7 @@ def filter_reads(contig_name, input_sam_fp, output_bam_fp): print(f"unmapped read count = {unmapped_reads} " f"({unmapped_reads/total_reads * 100:.2f}%)", file=sys.stderr) else: - print("No reads found during host filtering", file=sys.stderr + print("No reads found during host filtering", file=sys.stderr) if __name__ == '__main__':