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grover

Lifecycle: stable R-CMD-check Codecov test coverage license GitHub release

Overview

The grover package provides a web-based API framework for remote access to a mass spectrometry .raw data repository, implemented using the plumber R package. API functionality includes:

  • File information retrieval including file size and creation dates.
  • File transfer.
  • Raw mass spectrometry data file conversion to .mzML format.
  • Retrieval of sample information from .raw file headers.

The package functionality is platform independent with file conversion and sample information retrieval functionality available through use of the msconverteR and rawrr R packages.

Installation

The grover package can be installed from GitHub using the following:

remotes::install_github('jasenfinch/grover')

Learn more

The package documentation can be browsed online at https://jasenfinch.github.io/grover/.

If you believe you've found a bug in grover, please file a bug (and, if possible, a reproducible example) at https://github.com/jasenfinch/grover/issues.