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We hit this problem matching 2021-04-19
Build:2021-04-18: 100%|██████████████████████████████████████████████████████████| 765/765 [00:00<00:00, 18642.11it/s] Preprocess: 100%|█████████████████████████████████████████████████████████████████| 1000/1000 [00:11<00:00, 87.16it/s] ms-match (1/0)100%|████████████████████████████████████████████████████████████████████████| 696/696 [00:56, 12.3it/s] ms-match (1/0)100%|████████████████████████████████████████████████████████████████████████| 357/357 [01:31, 3.89it/s] ms-match (1/0)100%|████████████████████████████████████████████████████████████████████████| 163/163 [02:02, 1.33it/s] ms-match (1/0)100%|██████████████████████████████████████████████████████████████████████| 4.00/4.00 [00:21, 5.46s/it] Traceback (most recent call last): File "/usr/lib/python3.9/runpy.py", line 197, in _run_module_as_main return _run_code(code, main_globals, None, File "/usr/lib/python3.9/runpy.py", line 87, in _run_code exec(code, run_globals) File "/scratch/jk/work/github/sc2ts/sc2ts/__main__.py", line 5, in <module> cli.cli() File "/home/jk/.local/lib/python3.9/site-packages/click/core.py", line 1157, in __call__ return self.main(*args, **kwargs) File "/home/jk/.local/lib/python3.9/site-packages/click/core.py", line 1078, in main rv = self.invoke(ctx) File "/home/jk/.local/lib/python3.9/site-packages/click/core.py", line 1688, in invoke return _process_result(sub_ctx.command.invoke(sub_ctx)) File "/home/jk/.local/lib/python3.9/site-packages/click/core.py", line 1434, in invoke return ctx.invoke(self.callback, **ctx.params) File "/home/jk/.local/lib/python3.9/site-packages/click/core.py", line 783, in invoke return __callback(*args, **kwargs) File "/scratch/jk/work/github/sc2ts/sc2ts/cli.py", line 345, in extend ts_out = inference.extend( File "/scratch/jk/work/github/sc2ts/sc2ts/inference.py", line 604, in extend samples = match_samples( File "/scratch/jk/work/github/sc2ts/sc2ts/inference.py", line 479, in match_samples match_tsinfer( File "/scratch/jk/work/github/sc2ts/sc2ts/inference.py", line 1295, in match_tsinfer manager = Matcher( File "/home/jk/.local/lib/python3.9/site-packages/tsinfer/inference.py", line 1653, in __init__ self.restore_tree_sequence_builder() File "/home/jk/.local/lib/python3.9/site-packages/tsinfer/inference.py", line 1672, in restore_tree_sequence_builder raise ValueError("Invalid left coordinates") ValueError: Invalid left coordinates
Something happend matching 4 recombinants in the backward direction. Hopefully can reproduce by running any match backwards on 2021-04-18.
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We hit this problem matching 2021-04-19
Something happend matching 4 recombinants in the backward direction. Hopefully can reproduce by running any match backwards on 2021-04-18.
The text was updated successfully, but these errors were encountered: